| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0283 |
|---|
| Symbol | |
|---|
| ID | 4920642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 300316 |
|---|
| End bp | 301836 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640161807 |
|---|
| Product | Mg chelatase, subunit ChlI |
|---|
| Protein accession | YP_001092414 |
|---|
| Protein GI | 127511217 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0606] Predicted ATPase with chaperone activity |
|---|
| TIGRFAM ID | [TIGR00368] Mg chelatase-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0321513 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCG CCTGCGTCAC CACGCGCGCC AGCCTAGGCG TGGCAGCTCC CGAAGTCACG
GTCGAAGTGC ATCTCAGCAA TGGCCTGCCC GCCTTCAGCC TGGTGGGACT CCCTGAAACC
TCAGTCAAAG AAGCCAAGGA GCGGGTGCGC AGCGCCCTGA TCAATGCCGG GTTTGAATTT
CCTCAACGCA GAATAACCGT CAATCTGGCT CCTGCGGATC TGCCCAAACA GGGGGGCCGC
TACGATCTCC CCATCGCCAT CGGTATACTG GCCGCCTCCA AGCAGGTGCC CGATACCCAT
TTGGCGGATC ATGAGTTCAT CGGCGAGTTG GCCCTCTCCG GGCAGATAAG ACCCTGCAGC
GGCATCTTGC CGGTGATCAT AGATGCCCGT AAACAGGACA AGACCTTAGT CCTCCCCTTG
GAGAATCGAG GCGACGCCGA GCTAGTCGGT TATCGAAAGT GCTTCTTCGC CGCCCACCTG
CAAGGCTTAG CCCAGTACCT GCACGGTCAG GCTTCGCTGC CCGGCCTGAC CCAAGATCTG
CAATGGCTGG ATACTCAGGC TGACACCGAC CACAAGTGCC TCAGCGATGT GATAGGCCAA
TATCAGGCCA AGCGCGCCCT GGAGATAGCC GCCGCCGGCA ATCATAACCT GTTGTTTCTC
GGCCCTCCTG GGACGGGCAA GACGATGCTG GCCAGCCGCA TGATGCAGCT GCTGCCGCCA
CTGGACTATG ACGAGGCGTT GGAGGTCGCC GCCATTCACT CGGTGGCGGG GCTCAGCATT
CCCATGCAGG CCTTTTATCG GCGCCCCTTT CGCTGCCCTC ACCACACCAG CTCGGCCATC
TCACTTGTGG GCGGTGGCAG CCATCCCAAG CCGGGCGAGA TCTCCCTTGC CCATCGCGGC
GTGCTCTTCC TCGACGAGGT GGCCGAGTTT CCCCGCAAGG TGCTCGATTG CCTGCGAGAG
CCGATGGAGA CAGGCGAGGT GGTGATCTCC CGTGCCGCCG CCAAGCTCAC TTTTGCCAGC
CGCTTTCAGT TGATCGCCGC CATGAACCCC AGCCCCTGCG GCGACAGTGC CAACGCCAGG
GCCACCCCAG ATCAGATCCA GCGCTATCTC GCCAGACTCT CGGGGCCCTT CATCGATCGC
TTCGATCTCA CCATAGAGGT GCCCCGGCTG CCCCAAGGCA CACTCACCAG CAGTCAGCGT
GGTGAAACCA GCCGAGATGT TGCTCAGCGA GTGCATCAGG CCAGAGAGCG CCAGCTGAGC
CGCGCCGGAG TGCTGAACGC TGAGCTGAGC GGTAAACTGC TCACGCAAAC CGCAGGCTTC
AGCCAGAAGG ATCTCGAGTT TCTCGAGCAG AGTGTCAACC AGCTCGGGCT CTCGGTGCGC
AGCTATCACA GGCTGCAGAG GGTTGCCCGC ACCATAGCCG ATCTTGAGCA GAGCAAAGAT
GTCGCCCGCC ACCACATCGC CCAAGCACTT GGCTATCGTG CCATGGATCG TCTGCTCAAT
AGCCTGAAAA CGCCTTACTG A
|
|---|
| Protein sequence | MAIACVTTRA SLGVAAPEVT VEVHLSNGLP AFSLVGLPET SVKEAKERVR SALINAGFEF
PQRRITVNLA PADLPKQGGR YDLPIAIGIL AASKQVPDTH LADHEFIGEL ALSGQIRPCS
GILPVIIDAR KQDKTLVLPL ENRGDAELVG YRKCFFAAHL QGLAQYLHGQ ASLPGLTQDL
QWLDTQADTD HKCLSDVIGQ YQAKRALEIA AAGNHNLLFL GPPGTGKTML ASRMMQLLPP
LDYDEALEVA AIHSVAGLSI PMQAFYRRPF RCPHHTSSAI SLVGGGSHPK PGEISLAHRG
VLFLDEVAEF PRKVLDCLRE PMETGEVVIS RAAAKLTFAS RFQLIAAMNP SPCGDSANAR
ATPDQIQRYL ARLSGPFIDR FDLTIEVPRL PQGTLTSSQR GETSRDVAQR VHQARERQLS
RAGVLNAELS GKLLTQTAGF SQKDLEFLEQ SVNQLGLSVR SYHRLQRVAR TIADLEQSKD
VARHHIAQAL GYRAMDRLLN SLKTPY
|
|---|
| |