| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0236 |
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| Symbol | |
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| ID | 4921803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 251517 |
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| End bp | 252434 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640161760 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001092367 |
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| Protein GI | 127511170 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.859767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGATAAGAA TGTTCAGAAA AAACGAACAA AAGCGGCTGG CATATCAGAT GTTGGTATTC
GACGAGGTGG TCAATCAGGG CTCCTTCACC GCCGCGGCCG AGGCGCTCGG TCATACCAAG
TCGGCGGTGA GCCAGTATGT GAGCCAGCTG GAGCAAGATC TCGGCGTCAA GCTGCTGACC
CGCAGTACCC GCCAGCTGCA TCTCACCACT CAAGGGGAGG CGATGGCTCA GCGCAGCCGT
CAGCTGTGGC GCCTGCTGAC CGAAACCCTG GAGGCGGCCC ATGACCAGCA GGCGGTGCCC
GGTGGGCGCA TGGCGATCAC CGCGCCCCTG GCCTTCGAGG CGCCGCTGCT CACCCCCATC
ATTGCCGAAC TCTGTGGCGA GTTTCCGCAG CTGCTGCCAG AGATGCACTA TGACGATGCC
CGGCTGGATA TCTTGCAGCA CAACCTGGAC ATGGCGATCT CCGTCGGGCC GCAGAAAGAC
AGCGGCTATC ATGCGATTCC TATCGGCCGA CTCGACAGCG TCCTGGTGGC CGCCCCTAGC
TATATCAACC GCAGCGCCGC CATTACGGCG GAGAGTCTGC GGGGTCACAG CCTGATAGTC
CTGCCCTGGC AGCGACCTCT GGTGCTGCAA GGCCCTAGCG GTCTGGCCTT CGAGGCGGCT
AAGGAGATCA AGGTCAACAC CTCCATCAGC GCTATCAACA GCGCCATTGC AGGTGTCGGC
ATTGCCCTGG TGCCCTCAAT CTTTATCGAG ACTGAGCTTG CCGAGGGCAA GCTGCAGCGG
GTGCTACCCG AGCACAGCGG CCCGTCGCGA GAGGTGTTTG CCATTCACGC CTACCAGCAA
CAGTTACCCC TGGCGTTGCG TTTAGTAGTG GAGAGGTTGA AAGAGGCCTT CAGGCAGAAG
GCCCCGGTAA GCGGCTGA
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| Protein sequence | MIRMFRKNEQ KRLAYQMLVF DEVVNQGSFT AAAEALGHTK SAVSQYVSQL EQDLGVKLLT
RSTRQLHLTT QGEAMAQRSR QLWRLLTETL EAAHDQQAVP GGRMAITAPL AFEAPLLTPI
IAELCGEFPQ LLPEMHYDDA RLDILQHNLD MAISVGPQKD SGYHAIPIGR LDSVLVAAPS
YINRSAAITA ESLRGHSLIV LPWQRPLVLQ GPSGLAFEAA KEIKVNTSIS AINSAIAGVG
IALVPSIFIE TELAEGKLQR VLPEHSGPSR EVFAIHAYQQ QLPLALRLVV ERLKEAFRQK
APVSG
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