| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0186 |
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| Symbol | |
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| ID | 4921309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 194005 |
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| End bp | 194490 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640161705 |
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| Product | cytochrome c-type biogenesis protein CcmE |
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| Protein accession | YP_001092317 |
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| Protein GI | 127511120 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2332] Cytochrome c-type biogenesis protein CcmE |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000150623 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00142907 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAACGCCA GACGTAAGAA AAGACTCGCC TTAGCAACCG CCCTGATTGG TGGCGTAGCC
GCCATCGCGT CCTTGCTACT TTATGCGCTC AATTCAAACT TGAACCTTTT CTATACCCCA
ACAGAGATCG TTCACGGTAA GAAAGACACA GGTGTTAAGC CGGAAATCGG TCAACGTATT
CGTGTAGGTG GCATGGTCAC CGTAGGTTCA CTAGTACGCG ATCCAGAGAG CCTACACGTT
GAGTTTGCCG TACATGACGC CGCCGGTGGC GAAGTTATGG TGACCTATGA CGATCTATTA
CCCGACCTCT TCCGTGAGGG ACAAGGTATC GTCGCCCAGG GCGTACTGAT CGAAGGTGGT
AAGCTGGAAG CGACCGAAGT ATTGGCCAAG CATGACGAAA ACTACATGCC GCCAGAAGTT
GCCGAGGCCA TGGGCCAGAC CCACGAGAAA CTAGAATACG ACTCTACGCA GAAAACCGGG
TACTAG
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| Protein sequence | MNARRKKRLA LATALIGGVA AIASLLLYAL NSNLNLFYTP TEIVHGKKDT GVKPEIGQRI
RVGGMVTVGS LVRDPESLHV EFAVHDAAGG EVMVTYDDLL PDLFREGQGI VAQGVLIEGG
KLEATEVLAK HDENYMPPEV AEAMGQTHEK LEYDSTQKTG Y
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