| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0150 |
|---|
| Symbol | |
|---|
| ID | 4922904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 165377 |
|---|
| End bp | 165745 |
|---|
| Gene Length | 369 bp |
|---|
| Protein Length | 122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640161669 |
|---|
| Product | ribosomal protein L7/L12 |
|---|
| Protein accession | YP_001092281 |
|---|
| Protein GI | 127511084 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0222] Ribosomal protein L7/L12 |
|---|
| TIGRFAM ID | [TIGR00855] ribosomal protein L7/L12 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000840717 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0325702 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATCA CTAAAGACCA AATCTTAGAA GCCCTTGCAG CTATGTCTGT AATGGAAGTT
GTTGAACTAA TCGAAGCAAT GGAAGAGAAG TTCGGCGTTT CTGCCGCTGC TGCTGTTGTT
TCTGGTGGTG CTGATGCAGG CGCTGCTGCT GAAGAGAAGA CAGAGTTTGA CGTAGTTATG
ACTTCTCACG GCGACAACAA AGTTGCAGTA ATTAAAGCTC TTCGTGGCGC TACAGGTCTA
GGCCTGAAAG AAGCCAAGGG TATGGCTGAA TCAGCTCCAG TAGCTGTTAA AGAAGGCATC
TCTAAAGAAG AAGCTGAAGC ACTGAAGAAA GAGCTTGAAG AAGCTGGTGC TCAAGTAGAG
ATCAAGTAA
|
|---|
| Protein sequence | MSITKDQILE ALAAMSVMEV VELIEAMEEK FGVSAAAAVV SGGADAGAAA EEKTEFDVVM
TSHGDNKVAV IKALRGATGL GLKEAKGMAE SAPVAVKEGI SKEEAEALKK ELEEAGAQVE
IK
|
|---|
| |