| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0104 |
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| Symbol | |
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| ID | 4923682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 113461 |
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| End bp | 113712 |
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| Gene Length | 252 bp |
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| Protein Length | 83 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161615 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092235 |
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| Protein GI | 127511038 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3042] Putative hemolysin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.93756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATAT CCCACACCAT AGCGGCGCTG CTTTTCCCCC TTGGCTTAGC CGCTTGTCAG
ACGCAGGTAG ACAAGGAGCA AGACGCCGCA GAGTCCAAAC CGCTATCCAT GGCCAACCCG
GCGGCCGTCT ATTGCGAATC CCTGGATGGC GCGCTCGACC TCGACAGCGG CATCTGCACC
CTGCCAAGTG GTGAACAGAT AGAGCACTGG GATCTCTACC GCCGGGATCA TCCACAGGCG
AAAAACCAAT AA
|
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| Protein sequence | MKISHTIAAL LFPLGLAACQ TQVDKEQDAA ESKPLSMANP AAVYCESLDG ALDLDSGICT
LPSGEQIEHW DLYRRDHPQA KNQ
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