| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4432 |
|---|
| Symbol | |
|---|
| ID | 5369317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009661 |
|---|
| Strand | - |
|---|
| Start bp | 50513 |
|---|
| End bp | 53323 |
|---|
| Gene Length | 2811 bp |
|---|
| Protein Length | 936 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640819228 |
|---|
| Product | TraG domain-containing protein |
|---|
| Protein accession | YP_001355450 |
|---|
| Protein GI | 152998529 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTTG AGATTTTCAC CTACAGCAAC GGTGACGTGG CCAAGCAAGT GATGAATGCC
ATTGCCGTGC TGTTCAAGTC CGATTCATTT GCCAGCATGA TAAGCATCTG TGCGCTGTTT
GCCGTTGTGG CCACCGCGCT GCACTTTTTC ATCAAGCGTG ACCATAACGC GATTATGAAA
TGGTGCGCGG TTTACTTTGC CGTGCCATTG CTTGCCATGA ACACCACCGC CACAGTGCAA
ATTACCGATT TAACCAATCC GACGGGTAAC TATCGCGTGG ACAATGTGCC CGCGATTGTG
GCGTATCCGG CCTCATGGGC GTCGCATTAT ATGTATGCCA CCACCCAAAC GGTGGAAGAT
ATTTTTCACG TACCCGATGA TCAACAATAC AGTAAAACGG GCATGATGTT TGGCTCTGAG
CTGTACAAGT TATCCAGACA AAGCGAGATA GAAAACACCC AACTTAAAGG CTATTGGCAG
CACTACATCA GCAGTTGTAT TCGCGGAGAT ATGCTACTCA ATAATAAATA CACATGGCGA
GATTTAGCCA GTGCACCGGA TATTTGGGAC TTTCTAGCGA CTCACAACCC TTCGCCACTA
CGGGCGATTC AAATGGGTCC TAATGACTAT CCTACCTGCA AAGAAGCCCT TCCGCGCCTC
AAGCAGCTAT TCCAAGCAGA CAGCGCAAAA AGCATCAAGC TACTGGGCAG TTGGATTTAT
GGTGAAAAAG CCAAAAGCCA AGAAAGTTTT TTGAATACCA GCATCAGCAG TGGTTATCAA
AAGTACGCCA ATATCAGTCA AAGCGCGTCG CAAATAACCT TGCAAAACAT GACGATTAAC
GCCCTGCGAA ATGGCCTCGC GGATGATGCA GCGGTGAGCA ACAACACCGC CGCCGCATTC
AACTACGCCT ATACACAAAA CAAAATGCAA ACCACATCGA TGTGGGCGGG AATGGCCCTG
CAGGCGCGCG AATTTTTGCC CATGCTGCAA TCGATTTTGT TTTTGCTGTT TAGCTCTGTC
GCCTTTTTAG TGGTGGCGAT TGCCATGATC CCCTCACTCA CGTTTCAAGT GCTCGGCAAC
TATTTCAAAG GCTTTATCTA CCTTGGCACA TGGCCGGTGA TGTTTGCCCT CATTAACTTC
ATCATGACCA CGCGCTTATC GCTTAACGCC ACTGAAATCA CTAACATTTA CGGCGGTATC
ACCTTAAGCA ACGTTGATCC CTTACAAGAA ATGCACTCCC GCTATGCGGC CATGACCGGC
TTTTTAATGA TGAGCGTACC GACATTAATT GTCCCGCTCA TTATGAAAGG CGGCGCGTCA
GTAATGAGCA GTATGTCGCA TCAGTTCGCG GGCATGATGA GCAGCGTTAA CGCGCGCACC
TCAGCGAGTG CGGCAAGTGG CGATATCAAT TTGGGTAACG CTCAGGTGGA TAACTACAGC
TACAACAACA CCAACGGCAA TAAAATCGAC ACCACAGGCG TTGAACGTAT TCATGGAAAC
ACCAAGCAAG ATGCAACAGG CTATGAGACC ACCACCTTTG ACGATGGCAG ACAAGTCATT
AATGGCCAAA ATGCCTTAAG CCGTAGCTTG CCAGTGAACA TTAGCGGCAG TGACGTGGTG
ACGAACTCAG CCTCGCAATC TGCCTCAAAC GCGATCAGTG CGAGCAAAAT AGAGGGTAAA
CAAGCAAGCG AAAGTATCGC CACCTCCACG AATACCGCAC TAAGTCAAAT GAGCGGGGTC
AATACCTCGA ACAGTTATGG CAGCAATAGC GCCACCGGCG ATAGCGGCAC CCATAACAAA
GGCTTCGCAG ATATGCGTAG TACGGTTAAG TCTTTTGCTA AGGACTTCAA CCTGACAGAA
GACCAAGCCA CAAGTACCTT ATTATCGATG TATGTCGGAG CAGAAGCAGG GGTGAAACTC
GGCACACCTG GGAGTGGATT TCTTGGCTCT AGTGCGCACG TATCCGGCTC TACCGGCACT
AAAGGCTCAA CCGATGATGT CAGCACAGAC CGTACCAGTG AAAGCGAACG TGACAGTCTC
CAGCAAAGCT ACCTTGACCA GTTCAGCGCT AACGTTAACA CCGTCAAATC CTATAACAGC
GGCGAACAAG CCAGTACAAC CAACAGTAAA AACGAAGGTG AAACCCAAAC CTTCCTACAA
GGGCTTAACG AAGCGATTAC CCACACCAAA AACGCCCAAT CCCAGCTCAC CGAAGCCCAA
AGTTACACTG ACCTCGCCAA TAATGTCAAA AGTGGCTCAA TCAGTATTGG GCGTGACTTT
AATCAAGACT TTGTGGAGTT CGTTAAAAAC TCAAGAAAAA ATGGTGATGC CATGGACGTG
ATCAAGGGGC AAACACCAGA AATGCAGCAA GAGCGTAACC AACTCGCAGC CGAGTTTGCC
AACACTCCCG AAGTCAAAGC GATGGTAGAA CAATACAAAA ACCATGAATT ACCGCAAAAC
CGCGATGACA TTGTGCAAGC TCAGGAGCGT TACGCCGCTG ACATTGATTT CAATAAACAG
CAATCACCAC AGTATGCCCC TGCGCCGCTC AATGACAGCC TCTACCAAAC GGGCGAATTT
GAGCGTATCC AAGGCCATGC GGCGCAAGGC AACGCGGAAA TTAGACAAGA TGTGTTGCAC
GAAGAACAGA CTCATAACGC ATCTAGCGTC CCGAGCATTG ATATAGAACA GGCCCGTGCT
GACGCAAAAG CGGCGCACGC CCTAATAAAG CCAGACAGTC GAAGTGATGA TGAAAAATTG
GCAGAAACAG TGCGTCAATC AAGTCCCTTT AATACAGGAC CAAAAATGTG A
|
|---|
| Protein sequence | MAVEIFTYSN GDVAKQVMNA IAVLFKSDSF ASMISICALF AVVATALHFF IKRDHNAIMK
WCAVYFAVPL LAMNTTATVQ ITDLTNPTGN YRVDNVPAIV AYPASWASHY MYATTQTVED
IFHVPDDQQY SKTGMMFGSE LYKLSRQSEI ENTQLKGYWQ HYISSCIRGD MLLNNKYTWR
DLASAPDIWD FLATHNPSPL RAIQMGPNDY PTCKEALPRL KQLFQADSAK SIKLLGSWIY
GEKAKSQESF LNTSISSGYQ KYANISQSAS QITLQNMTIN ALRNGLADDA AVSNNTAAAF
NYAYTQNKMQ TTSMWAGMAL QAREFLPMLQ SILFLLFSSV AFLVVAIAMI PSLTFQVLGN
YFKGFIYLGT WPVMFALINF IMTTRLSLNA TEITNIYGGI TLSNVDPLQE MHSRYAAMTG
FLMMSVPTLI VPLIMKGGAS VMSSMSHQFA GMMSSVNART SASAASGDIN LGNAQVDNYS
YNNTNGNKID TTGVERIHGN TKQDATGYET TTFDDGRQVI NGQNALSRSL PVNISGSDVV
TNSASQSASN AISASKIEGK QASESIATST NTALSQMSGV NTSNSYGSNS ATGDSGTHNK
GFADMRSTVK SFAKDFNLTE DQATSTLLSM YVGAEAGVKL GTPGSGFLGS SAHVSGSTGT
KGSTDDVSTD RTSESERDSL QQSYLDQFSA NVNTVKSYNS GEQASTTNSK NEGETQTFLQ
GLNEAITHTK NAQSQLTEAQ SYTDLANNVK SGSISIGRDF NQDFVEFVKN SRKNGDAMDV
IKGQTPEMQQ ERNQLAAEFA NTPEVKAMVE QYKNHELPQN RDDIVQAQER YAADIDFNKQ
QSPQYAPAPL NDSLYQTGEF ERIQGHAAQG NAEIRQDVLH EEQTHNASSV PSIDIEQARA
DAKAAHALIK PDSRSDDEKL AETVRQSSPF NTGPKM
|
|---|
| |