Gene Shew185_4421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4421 
Symbol 
ID5369247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009661 
Strand
Start bp35917 
End bp36846 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content51% 
IMG OID640819217 
Producthypothetical protein 
Protein accessionYP_001355439 
Protein GI152998518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.0000987997 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.121294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA AGCTTGCCGT GGCTCTACGT TCCTGCTTGC CAATCCCTAA CGCAACCGCC 
AAACCGCCAA GCACAGTCCT ACTCACTGCG CGGCAAGTGT GGCTAAGCTG GTCGTTTCAT
TCGGCATCAT GGCCGCTCCT GGTTCTATCC CTTTCGTTTA CGCTTCCGTC TTATCTGTCG
CTCACCACAA CCCGCTTGCC AAGGGTTCGC TTCGCCGCTG CGCGCCCTTG TCAATCAGAA
CGATGGCGAG CGAGCAGGAC GTCAGGCGAA AACGAAGATG ATAGACCCCA AACGGAGCAA
GCAGCCATGA CACACTCAAT CACTACCCCA GCAAGCCACA CTAAGCCTTT CAGCGAGCAA
GCCAGCTTAC AAGCGACAAG CAGGCTCTCC AAAGACGATA TTCAACAGCA AAAAAGGGGC
GAGTTGACGA TCATTGTTTT AACTGAAATG AACTTCTTCC ACTTCTGCGG CCTCGGACTT
GAAGGGGTGG CAAATGAAGC ATGGTATCCC TACTCACAGG GGTTGTTGTT TGAAGCGGTT
GAACGGTTCT TGGTCGCGGC AAAAGTGGCT CAAAATGTCG TATCAATCGA TCAACCTCGA
CGCAATGGCG CAAGTATTGA TTATCGCGTG CGTTTCAATG TGTTTAGCAC TGACAAAAAA
CGGGTTTCGG TTCGTTTTCC TGTCGTGATT AAGAATTTTG GCAACGATAC GCAATGCCTC
TCAGTCGATG AACTAACGAG GGCGTTAAGT CTGAACTATC GAAATAAGCA CGTTTCAATC
ATGTGGTCTT TACCCTCGGG GATCATATCA ACGGTTTATG TGTCGGTGGC GGCTGACGGG
GAGATAAGCG ATTGCTATAC ACATCATGCC CTTTGGTTTG TGATGGAAGG GGGCTGCATT
GAGTTGGCCA CTAACACGGG GGCGATATGA
 
Protein sequence
MASKLAVALR SCLPIPNATA KPPSTVLLTA RQVWLSWSFH SASWPLLVLS LSFTLPSYLS 
LTTTRLPRVR FAAARPCQSE RWRASRTSGE NEDDRPQTEQ AAMTHSITTP ASHTKPFSEQ
ASLQATSRLS KDDIQQQKRG ELTIIVLTEM NFFHFCGLGL EGVANEAWYP YSQGLLFEAV
ERFLVAAKVA QNVVSIDQPR RNGASIDYRV RFNVFSTDKK RVSVRFPVVI KNFGNDTQCL
SVDELTRALS LNYRNKHVSI MWSLPSGIIS TVYVSVAADG EISDCYTHHA LWFVMEGGCI
ELATNTGAI