Gene Shew185_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4340 
Symbol 
ID5370014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5175844 
End bp5177037 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content49% 
IMG OID640832603 
Product2-amino-3-ketobutyrate coenzyme A ligase 
Protein accessionYP_001368517 
Protein GI153002836 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCTCTA CCTCATTCTA CGCACAGATT AATCAACAGC TTGCAGACAT CAAAGCCGAA 
GGCTTATATA AAAGCGAGCG TGTTATTGCC TCACCGCAAC AGACAGCCAT TCAAGTTAAT
CAGCAAGAAG TTATTAACTT TTGCGCGAAT AATTACTTAG GCTTGGCGAA TCACCCAGAG
CTAATCAAAG CCGCCCAACA GGGCTTAGAC AGCCACGGCT TTGGTATGGC GTCGGTACGT
TTTATTTGCG GCACCCAAGA TATCCATAAA AAGCTAGAAG CTAGCCTAAG CGAATTCCTC
GGCACTGAAG ACACCATTCT TTACTCTTCA TGTTTTGATG CAAACGCCGG TCTGTTCGAG
ACCTTGTTAG ATGCAGAAGA CGCGATTATT TCCGATGCGT TAAACCATGC TTCTATCATC
GACGGTGTAC GTTTATGTAA AGCCAAGCGT TTCCGTTATG CCAACAACGA CATGGCCGAT
TTAGAAACTC AGCTGATCGC CGCTAAAGAA GCTGGCGCCC GTAACATCTT GATCGCCACC
GACGGCGTAT TTTCGATGGA CGGCGTGATC GCAAACCTTA AAGGCGTATG TGATTTAGCC
GATAAATACG GCGCACTGGT GATGGTCGAT GACTCTCATG CTGTGGGCTT TATCGGTGCG
AACGGCCGTG GCACCCACGA ATATTGCAAT GTGATGGACA GAGTCGACAT CATCACAGGC
ACCTTAGGCA AAGCCTTAGG CGGCGCATCG GGCGGTTTCA CTTCGGGTAA AAAAGAAGTC
ATTGACTGGT TACGCCAGCG TTCACGTCCT TACCTGTTCT CTAACTCATT AGCGCCGTCA
ATCGTGACTG CGTCTATCCA TGTGTTAGAA ATGCTCAAAT CAGGCCAAGC ACTGCGCGAA
GCCGTATGGG AAAACAGCCG TTATTTCCGT GAGCAAATGT CAGCAGCTGG CTTTACCTTA
GGCGGCGCCG ACCACGCGAT TATCCCTGTG ATGATTGGCG ATGCGAAACT GGCGGGCGAC
TTTGCTAACC GCTTATTAGC AGAACATATT TATGTTATTG GCTTCTCGTT CCCTGTGGTT
CCTAAGGGAC AAGCACGTAT CCGTACGCAA ATGTCAGCGG CACATACCCG TGAGCAACTC
GACAAAGCGA TCACCGCCTT TACCCGTATT GCCAAAGAAA TGGGCATTAT TTAG
 
Protein sequence
MASTSFYAQI NQQLADIKAE GLYKSERVIA SPQQTAIQVN QQEVINFCAN NYLGLANHPE 
LIKAAQQGLD SHGFGMASVR FICGTQDIHK KLEASLSEFL GTEDTILYSS CFDANAGLFE
TLLDAEDAII SDALNHASII DGVRLCKAKR FRYANNDMAD LETQLIAAKE AGARNILIAT
DGVFSMDGVI ANLKGVCDLA DKYGALVMVD DSHAVGFIGA NGRGTHEYCN VMDRVDIITG
TLGKALGGAS GGFTSGKKEV IDWLRQRSRP YLFSNSLAPS IVTASIHVLE MLKSGQALRE
AVWENSRYFR EQMSAAGFTL GGADHAIIPV MIGDAKLAGD FANRLLAEHI YVIGFSFPVV
PKGQARIRTQ MSAAHTREQL DKAITAFTRI AKEMGII