Gene Shew185_4293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4293 
Symbol 
ID5370903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5124398 
End bp5124805 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content37% 
IMG OID640832556 
ProductSH3 type 3 domain-containing protein 
Protein accessionYP_001368470 
Protein GI153002789 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGGC TATGGGTGCT AGTGCTAGTA TTTTTAATGA GTAATTTGAT ATCAGTTGCT 
TACGCTAAAA ACTGTAAGAA AGGCCAACCA TGTGGTAATT CATGCATTTC GTGGAATAAA
ACTTGCCATG TTGGTACATC AAGTCAGAGC TATAAATCGT CTACATTGTA CGGCGCAAAT
AATATCCAAT CCTCTGGTGT TAAAGGTACC AGCGAACCTA CATCTGAGAA TGTACAAGTA
TTTGAAGTTA CAGTAGATAA GCTCAATGTT AGAGATAAGC CTAATCGTAA TGGATATCTA
CTCGGCTCAC TTTTAAAAGG AGAGCGTATT GAAGTTATTA CCACCAGTGG TGACTGGAAG
TTTTTTTATA TAAAAACCAA GTTGCTTGGG TACTTTCGGT TTATTTGA
 
Protein sequence
MNRLWVLVLV FLMSNLISVA YAKNCKKGQP CGNSCISWNK TCHVGTSSQS YKSSTLYGAN 
NIQSSGVKGT SEPTSENVQV FEVTVDKLNV RDKPNRNGYL LGSLLKGERI EVITTSGDWK
FFYIKTKLLG YFRFI