| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4223 |
|---|
| Symbol | |
|---|
| ID | 5373041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 5036653 |
|---|
| End bp | 5037177 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640832488 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_001368402 |
|---|
| Protein GI | 153002721 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG AACAGGTTTC GACATCTTTA CCTAAACGCA TATTGGGCTG GATTAAGCAG
CTGGCACTTT GGCTGCTCAT TGCTCTTATC GTGACCAGCG TGATGGACAT CTGGCGCGGC
AAAGATATCC CGCGGGATAA TTTGCCGCAA CTCCAAGGGA CGACGTTGGC AGGGGATACG
CTTGATATTG CCACGCTCAG CCAAGATCAG GCGGTATTGG TGTACTTTTG GGGCACTTGG
TGTCCTGTGT GTAATTTTGT CAGCCCAGCG GTCAATCAAA TGTCGGCCTA TTACCCCGTG
GTGACGGTTG CCATGAGTTC GGGTGAGGAT GAGAAACTGA GAAAATATCT TCAGCATCAG
GATTATGGCT TTGACACTAT TAACGATAGT GACAGCAAGA TTGCCCGTGA TTGGTCATTG
CAGGCGACGC CAACCATTAT GATCTTTAAA GATGGCGAGT TAAAACACTA CACGACTGGT
TTTACTAGCC TGCCTGGTAT GTGGTGGCGA ATGATGTTCA CTTAG
|
|---|
| Protein sequence | MSAEQVSTSL PKRILGWIKQ LALWLLIALI VTSVMDIWRG KDIPRDNLPQ LQGTTLAGDT
LDIATLSQDQ AVLVYFWGTW CPVCNFVSPA VNQMSAYYPV VTVAMSSGED EKLRKYLQHQ
DYGFDTINDS DSKIARDWSL QATPTIMIFK DGELKHYTTG FTSLPGMWWR MMFT
|
|---|
| |