| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4202 |
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| Symbol | |
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| ID | 5373559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 5006643 |
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| End bp | 5009006 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640832467 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001368381 |
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| Protein GI | 153002700 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0326222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACTA ATGCACATAA CATCGCTCAG ATTATCGCTC AAGAACTGAA TGTTCGTGAG
CAACAAGTTG CCGCAACCAT CACTCTGCTT GACGATGGTG CGACAGTTCC CTTCGTTGCC
CGTTATCGTA AAGAAGCCAC GGGCGGATTA GACGATACGC AACTGCGTAC CTTGTATACA
CGTTTAGGTT ACCTGCGTGA GCTGAACGAC AGACGCCAAG TGATTCTGTC TAGCATCCAA
GCTCAGGGTA AGTTAACGCC AGAATTACAA AGGGCTATTG ACGACGCAGA CAGCAAGACA
CGTCTCGAAG ATTTGTATCT GCCCTTCAAA CCTAAGCGCC GCACTAAGGG CCAAATCGCT
ATCGAAGCTG GGCTTGAACC GTTAGCCGAT GCCTTACTGG CTGACCGTAG CGCCGATGTT
GAAGCCAAAG CGGCGGGTTA TATCAATAGC GACGCGGGTT TTGTCGATGT GAAAGCTGTG
CTTGAAGGCG CGCGTTATAT TCTGATGGAG CGCTACGCCG AAGACGCGGA ATTACTGCGT
AAAGTGCGTG AACATTTAAG CCAAAACAGT GTGTTAGAAA GCCGCTTAAT TGCAGGTAAA
GAGAAAGAAG GCGCGAAATT CCGTGATTAT TTCGAGCATA CCGAACAGTT AGCTAAGATC
CCTTCTCACC GTGCGCTGGC GATGCTGCGT GGTCGTAACG AAGGTTTCTT AGCGTTATCT
ATGAATGCCG ATCCTGCTGC TGAGGCCGGT CAAGGTAGTT ATTGCGAAGT GATTATCAGT
GATCACTTAG GGCTGAAACT GGGCGATAGC AGCGTCGATC AATGGTTGAA AACTGTAGTG
ACGGCGACAT GGCGCATTAA GATTGCGCTA CAGATGGAAA CCGAGTTTAT TTCGCAAATG
CGCGAACGCG CCGAAGCCGA GGCCATTAAA GTTTTCGCCC GTAACTTAGG TGATTTATTG
ATGGCCGCTC CAGCGGGCGC GAAAGCGACC ATGGGACTCG ATCCAGGTTT ACGTACTGGC
GTGAAAGTGG CGGTGGTCGA TAACACGGGT AAGATGTTGT GCCATGCGAC GATTTTCCCG
CATGCACCGC AAAATCTGTG GGAAAAGTCG ATTCGTACTC TGGCGAACTT AGTCAAAATG
CATAAGGTTG AATTGATTGC GATTGGTAAC GGCACGGCAT CACGGGAAAC CGACAAGCTG
GCCGCTGAGC TGATTGCCGC CGTGAAAGAT ACCCATCCAG AGTTGACTAA AGTGATGGTC
AGCGAAGCGG GCGCGTCTGT GTATTCGGCA TCGGAATTGG CGACGCTAGA GTTTCCTGAT
CTCGATGTCT CGATTCGTGG TGCTGTGTCT ATCGCGCGTC GTTTGCAAGA TCCGTTAGCC
GAACTGGTGA AGATTGAGCC TAAGTCTATC GGTGTGGGCC AATACCAACA CGACGTGAGC
CAAAGCCAAT TATCGGGTTC GCTGGAAGCC GTGGTGGAAG ACTGTGTAAA CGGCGTGGGT
GTGGATCTCA ACATGGCCTC AGCACCTTTG TTGTCGCAAG TAGCCGGTTT AAACAAGACA
TTAGCGAAAA ATGTGGTCGA TTATCGCGAT GCCAATGGTC AGTTTAAGAA TCGTAAAGAG
CTGCTGAAAG TGCCACGTTT AGGGCCTAAA GCCTATGAGC AAGCGGCGGG CTTTTTGCGT
ATTCGTGAAG GTGACAACCC ACTCGATGCA TCTTCTGTGC ATCCAGAGGC TTATTCGTTA
GTGGAAACTA TCGCTAAGAC TAAGCAAGTG GAACTGGCGA GCCTGATGGG TAACTCAGAT
CTACTGCGCA GCATCAAACC TGAAGAGTTC ATTACGACGG AGTTTGGTTT ACCAACTGTG
ACGGATATTT TAGCCGAGCT GGATAAGCCG GGACGCGATC CCCGTGGTGA GTTCAAAACC
GCCAAGTTTA AAGATGGTGT GGAAGAACTT AAGCACTTAA AACCTGAAAT GGTGCTCGAA
GGCGTAGTGA CCAACGTGAC TAACTTTGGT GCCTTCGTCG ATATTGGCGT GCATCAAGAT
GGACTGGTGC ATATCTCCTC ACTGACCGAC AAGTTTATTA GCGATCCCCA CACAATCGTG
AAAGCGGGTG ATGTGGTGAA AGTTAAAGTG ATGGAAGTAG ATGTTGAGCG TCGCCGTATC
GGTTTGAGCA TGCGTTTGGA TGAAGCTATC GATCAAAGTA AATCGCAGCA AAGACCACAT
AATCCTGCCA GAACTCATAA TGGTAAGGCA CCACAGTCGA CGAAACCTGC TGCACGTCCT
GCGCAAAAGC AAGCACCTAA AGCACCTGCG AACGCGGCCA TGGGCAATGC CTTTGCCGAT
GCCTTCGCTA AGCTGAAAAA GTAA
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| Protein sequence | MQTNAHNIAQ IIAQELNVRE QQVAATITLL DDGATVPFVA RYRKEATGGL DDTQLRTLYT
RLGYLRELND RRQVILSSIQ AQGKLTPELQ RAIDDADSKT RLEDLYLPFK PKRRTKGQIA
IEAGLEPLAD ALLADRSADV EAKAAGYINS DAGFVDVKAV LEGARYILME RYAEDAELLR
KVREHLSQNS VLESRLIAGK EKEGAKFRDY FEHTEQLAKI PSHRALAMLR GRNEGFLALS
MNADPAAEAG QGSYCEVIIS DHLGLKLGDS SVDQWLKTVV TATWRIKIAL QMETEFISQM
RERAEAEAIK VFARNLGDLL MAAPAGAKAT MGLDPGLRTG VKVAVVDNTG KMLCHATIFP
HAPQNLWEKS IRTLANLVKM HKVELIAIGN GTASRETDKL AAELIAAVKD THPELTKVMV
SEAGASVYSA SELATLEFPD LDVSIRGAVS IARRLQDPLA ELVKIEPKSI GVGQYQHDVS
QSQLSGSLEA VVEDCVNGVG VDLNMASAPL LSQVAGLNKT LAKNVVDYRD ANGQFKNRKE
LLKVPRLGPK AYEQAAGFLR IREGDNPLDA SSVHPEAYSL VETIAKTKQV ELASLMGNSD
LLRSIKPEEF ITTEFGLPTV TDILAELDKP GRDPRGEFKT AKFKDGVEEL KHLKPEMVLE
GVVTNVTNFG AFVDIGVHQD GLVHISSLTD KFISDPHTIV KAGDVVKVKV MEVDVERRRI
GLSMRLDEAI DQSKSQQRPH NPARTHNGKA PQSTKPAARP AQKQAPKAPA NAAMGNAFAD
AFAKLKK
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