Gene Shew185_4185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4185 
Symbol 
ID5370839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4989147 
End bp4989911 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content48% 
IMG OID640832450 
Producthypothetical protein 
Protein accessionYP_001368364 
Protein GI153002683 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATATC CTTATGTTCT GCTGAATAAA TTAACGGTTT TTTTACTGAT ATTGACTGTG 
GCTGTATTCG TGATGTTGGT CAAGTTGGGT CTATGGCAAT TAGCCCGCGG CGAAGAAAAA
ACCATGCTGT TAGCCCAAAT GGAGGCAAGA CAATCCTTGC TGCCATTAAG TTTTGAGCAG
CTCCAACTCA AAATCGATAA GGAAGGCGTG ACAGGTTATC GACTGCAAGT GCACGCCATA
CCCGCGAGCT CGCAAATATG GCTGCTGGAT AATCAAATCT ATCAGGGCCA AGTGGGCTAT
TTAGCCTTTC AGCCCCTGCA AGTGACTGCG GGTCAACCTT GGTTATTGGT CGAATTAGGT
TTTGTCGCTG CCAGTTCCCA CCGTGATGAG TTGCCCCACA TCAGCCCACT TAGCGGTGAA
TTGAATATCG AAGGTCGGCT TTACCAAAAG CAAATCAATC CTTTGAGCCA GGCTTTAATG
GCAGAAACGG GGACAAGTAT TCGCTTTCAG AATTTGAATA TACCGGAAAT GGCGCAGCTG
TTAGGCCACC CTTTACTAGA TGCAGTGCTG CAACCGGATG AGCTACCCGC CCTCGCCTTG
CCGCATCCTT GGCAACCCTT CCCACTGTCT GCGCAAAAAC ATTGGGGTTA TGCGCTGCAG
TGGTTTTCGA TGGCAGCCGT GTTTGCTGGG CTCATGCTGT GGCAAGGGAT TAAGTATGTA
AAACGCCATA GTGCCGAAAC AATCGCAAAC TCAAGGAGCG AATAG
 
Protein sequence
MQYPYVLLNK LTVFLLILTV AVFVMLVKLG LWQLARGEEK TMLLAQMEAR QSLLPLSFEQ 
LQLKIDKEGV TGYRLQVHAI PASSQIWLLD NQIYQGQVGY LAFQPLQVTA GQPWLLVELG
FVAASSHRDE LPHISPLSGE LNIEGRLYQK QINPLSQALM AETGTSIRFQ NLNIPEMAQL
LGHPLLDAVL QPDELPALAL PHPWQPFPLS AQKHWGYALQ WFSMAAVFAG LMLWQGIKYV
KRHSAETIAN SRSE