| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4122 |
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| Symbol | |
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| ID | 5371050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4919922 |
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| End bp | 4920803 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640832388 |
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| Product | patatin |
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| Protein accession | YP_001368302 |
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| Protein GI | 153002621 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4667] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00238218 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATG TGGCCTTAGT GTTGGAAGGT GGCGGCCTTC GAGCCATTTA TACCGCAGGT
GTGTTAGACG CGTTTTTGCA GCAGTCGCTC AACTTCAACT ATGTGATTGG GGTATCTGCG
GGCGCCATTT ATCCCGCGTC CTATGTGTCC CGCCAATTCG GTCGTAATCT TCAAATTCAG
CAGCAATATC TCAACGACAA ACGCTATATG GGCCTACGCC ATTGGCTGGC AACGGGCAAC
TATGTCAACA CTGACTTTAC CTATCGCCGC ATGGCCTATG AGTTACTGCC ATTTGATTTT
GATACATTTT TAAATAGTCA TACCGAATTT AAGGTTGGCG CCTTTAACTG CAATACAGGG
AAAACCGATT ACTTCGGTAT GGCCGATTTT AATGACCACG ATAAATTACT CGACGTGCTC
ATCGCCTCCT CTAGCCTACC TTTTATGTCT AAACCCAGCG TGATTAACCA ACACCATTAC
CTCGATGGCG GCATCGGCGA ACCGATACCG TTAGCGCAAT CACGCAAAGA TGGTTATGCA
CGCCAAGTGG TGATCTTGAC TCAAGATCAG CATTACCAAA AGTCCGCAAT GAAAATGAAT
TGGTTAGCCC ACAAAGCCTA CAAACGCTAC CCCGCAGTTG CCCATGCGTT AAGTGAGCGC
CACCGAGTTT ATAATCACGC ATTAACCGAG TTAGACCAAG CCGTTGCAGC GAATAACGCC
TTTGTGATCC GCCCAGCACT GCCGCTTAAT TTATCCAGGC TCGATCGCAA TATCGATAAA
GTGACCGCCG TCTATCAACA AGGGCTAGCG GATGGAAAAG CAGTCTTACC CACATTAACC
GCTTGGTTAG CGGCGCCAAA AGAGCCTAAA CCCGAGGCGT AA
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| Protein sequence | MKDVALVLEG GGLRAIYTAG VLDAFLQQSL NFNYVIGVSA GAIYPASYVS RQFGRNLQIQ
QQYLNDKRYM GLRHWLATGN YVNTDFTYRR MAYELLPFDF DTFLNSHTEF KVGAFNCNTG
KTDYFGMADF NDHDKLLDVL IASSSLPFMS KPSVINQHHY LDGGIGEPIP LAQSRKDGYA
RQVVILTQDQ HYQKSAMKMN WLAHKAYKRY PAVAHALSER HRVYNHALTE LDQAVAANNA
FVIRPALPLN LSRLDRNIDK VTAVYQQGLA DGKAVLPTLT AWLAAPKEPK PEA
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