| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4121 |
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| Symbol | |
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| ID | 5372407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4918831 |
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| End bp | 4919844 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640832387 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001368301 |
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| Protein GI | 153002620 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000919638 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA ACATGATCAA AGGCATGATC GTTTTTGCGG CAATCGCAGA AAAGGGCTCA
ATGAGTGCCG CAGCGCAGCA GTTAAACCTC AGCTCCTCAG CGGTGAGTCA ACAAGTGACT
AAGCTCGAAA TGGACATGGG GATCAGTCTA TTCCACCGCA ATACTCGCAA TCTTACCCTC
ACAGAGGCGG GCAGCTTGTT TTATGAGAAT TGCCGAAAAG TCATCGCGAT AGTCGAAAGT
ACAGAGCAGA AACTCAATAA CTTGAAAGGG ATTCCTTCGG GGGAATTAAA GATTGCCGCG
CCCATAGGTT TTGGCGGCGG CCTATTGAGC GAGCCCTTTA ACTACCTGTT GGCGGCGCAT
CCGCAGATAA GTTTGAATTT ACTGCTGCAG GATGGCCCGA TAGATATAGT CAACGAGGGC
ATAGATCTGG CGATTTGCAT CGGTCCTTTA TCAGACTCCA ACTTAATTGC CCGCCACTTA
GCCGATTGGC GCATGTTGCT GTGCGCCTCA CCCGATTATT TGCCAATGCA CAAAATTTTT
AAGCATCCCG CTGAATTGGC TGCCTTTAAT CGCATTAATC ACCCCTGCGC TAACAGTGAA
ACCTTGACCC ACACCCGCAG CCAAGAGTGC TTCGAGCTGA CAAGCCAACG TATTACGGTC
AACAATATGC AGGCATTAAT CCAACTCACT CTCGATGGTC TCGGGTTTGC CGCCCTGCCC
GAACCTGAAG TGCATAAATA CCTCGAAAGC GGCCAGCTTG TCACCCTCTT ACCCGAGTGG
TCACTCAATA CCTACAGCGT TTATAGCGTC ACTTCAGCGC GGGATAAGCA GCCCGCGAAA
GTGAAAGAAG CGCTCAATAC GCTTAGCCAA TACTTCAGTC AGGCGAATTT TAACCCTGCC
TATCACTTTA AACAGTGTGT TCAAAAAGAC TGCACAAAGG GTAGCGTAAC CAATATCTTA
CCCATAAAAC TCAAGCAAGC GTCCCATCAC ACCGACGTCG ACCACGCTTC TTAA
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| Protein sequence | MNKNMIKGMI VFAAIAEKGS MSAAAQQLNL SSSAVSQQVT KLEMDMGISL FHRNTRNLTL
TEAGSLFYEN CRKVIAIVES TEQKLNNLKG IPSGELKIAA PIGFGGGLLS EPFNYLLAAH
PQISLNLLLQ DGPIDIVNEG IDLAICIGPL SDSNLIARHL ADWRMLLCAS PDYLPMHKIF
KHPAELAAFN RINHPCANSE TLTHTRSQEC FELTSQRITV NNMQALIQLT LDGLGFAALP
EPEVHKYLES GQLVTLLPEW SLNTYSVYSV TSARDKQPAK VKEALNTLSQ YFSQANFNPA
YHFKQCVQKD CTKGSVTNIL PIKLKQASHH TDVDHAS
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