Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4100 |
Symbol | |
ID | 5372935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4891901 |
End bp | 4892791 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640832366 |
Product | formate dehydrogenase subunit FdhD |
Protein accession | YP_001368280 |
Protein GI | 153002599 |
COG category | [C] Energy production and conversion |
COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.015822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTCGG AAAACAGCAT GGGCACAGAT AAAGAAGTAG CGGCAGCTAA CCCCACTCAG AAGCCTCATC ATCAGTGTTC TTTTGTGAGA ACCCAAGCGG AAGTACCGTT AACCATTGCC GTAAAAGCAG TGAATGAAGC TGGGGAAGTG CTAGATAAAT TTGTCGCCTG CGAACGTCCA CTTACCGTTT ATTTAAACTG GCGTCCGATA GTGACGCTGA TGACCCTAGG GGCAAAACCT GAGTCTCTGG CGTTAGGTTA TCTTAAGAAC CAAGGCTTTA TTTCGGATGT GAGCCTGCTG GACTCTGTCA TCGTCGATTG GGATGTGAGT TCTGCGGCTG TGGTTACCCG TGAACAAACT GCCGATCTCG ACGAGAAGCT CTCTGAAAAA ACCGTGACGT CAGGCTGTGG TCAAGGCACG GTTTATGGCA GTTTCATGCA GGATCTAGAT AACATCAATT TACCTACACC GAGTTTGAAG CAAAGCACGC TGTATAGCTT ATTGAAAAAT ATCAACGAAT ATAACGAAAC CTATAAGAAT GCTGGCGCTG TGCATGGCTG TGGTTTGTGC GAAGACGATA GGATTATGGC CTTCGTTGAA GATGTCGGCC GCCATAACGC CGTTGATACC TTGGCAGGGG ATATGTGGCT GACGCAGGAT CGTGGTGATA ACAAGATTTT TTATACCACA GGCCGATTAA CCTCTGAAAT GGTGATTAAA GTCGCCAAGA TGGGGATCCC CATTTTGCTA TCACGTAGCG GCGTCACTCA GATGGGCTTA GCACTGGCGC AGCAGTTAGG CATTACTATT ATCGCCCGCG CTAAAGGTCG ACACTTTTTG GTGTATCACG GCAGTGAAAA TCTGCAATTT GATGCCAATA CGGCTCCTTA G
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Protein sequence | MISENSMGTD KEVAAANPTQ KPHHQCSFVR TQAEVPLTIA VKAVNEAGEV LDKFVACERP LTVYLNWRPI VTLMTLGAKP ESLALGYLKN QGFISDVSLL DSVIVDWDVS SAAVVTREQT ADLDEKLSEK TVTSGCGQGT VYGSFMQDLD NINLPTPSLK QSTLYSLLKN INEYNETYKN AGAVHGCGLC EDDRIMAFVE DVGRHNAVDT LAGDMWLTQD RGDNKIFYTT GRLTSEMVIK VAKMGIPILL SRSGVTQMGL ALAQQLGITI IARAKGRHFL VYHGSENLQF DANTAP
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