| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4069 |
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| Symbol | |
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| ID | 5372314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4852641 |
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| End bp | 4854545 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640832333 |
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| Product | LppC family lipoprotein |
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| Protein accession | YP_001368250 |
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| Protein GI | 153002569 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3107] Putative lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAAAAA GCCTGAATAC AACTAAGTTC GTTTCCGTGG CCATTTTATC GGTAATCTTG
GCGGGTTGTG GTGTTTCATC GCCCAATTCC ACTGGAACAA CCGCCACATT GGCTACCTCA
TTAGCATCCG CACCTATGGC GGCAAATGTC TATTTGGCGC AAGCGGCCAA TAGTAAAGAT
CCGCAGCAGC GCGATACTAA TCTGCTGCTA GCAGCCCATG CCTATATTAA TGCCAATGAT
TACGCCGCGG CGCAGAAGCT ACTTAAATCG ATACAGCCGA GCTTAACTCA GAGCCCAACA
TTACTGGCCG AACATAAATA CTTAACTGCA CGTGTGCTTG AACACACGTC CACCTACAGT
GATGCCCTTA AAACCTTAAA TTATCCAAGT AATTGGAGCC TGCCAAGCTG GCAGATGACG
GCCTATCACC AGTTCAAAGC GCATTTATAT CAATTGAATA AACAGCCAAT TGAACAAGTA
CGCGAGTTGA GTTTACTGAC AACTTACTTG CCACCCGCCC AAGCCAACGA AGTGAATAAC
ACCATTTGGC AAGTGCTGCA GCCGATGCAC GAACAAACTA TAAAGACGTT TACCCAAGAT
GCTAAAAGTC CAGTGTTTGC AGGCTGGTTA CAACTGGCTT ATATCGCTAA GCATTATGCC
GTCGATCCCA CCCAGTTAGT GCGCTACTTA GGTGAATGGC AAAAGCAGAA CCCTTATCAC
CCAGCTGCGG CAAAGTTGCC TGCCGATTTA GACAGAGCCC TCAACGCTAA GCCTTTTACA
CCGAAAAACA TTGCCGTGCT GTTGCCGCTG ACTGGCCCAA GAGCGAACGC CGCCAATGCG
ATTCGCCAAG GCATATTAGC CAGCTATATG GCGAAGCAAA ACGATAAAGT CGCAGTGAAC
TTTTACGATA CGGCCAACGA TGCGGCGAGT GCCTATCAAC AGGCGCTGAT GGCGGGAGCC
GAGTTTATTA TTGGCCCATT ACTGCCGACT GAAATCGAAC AACTGCAAGT GATGAATGCG
GCAAATACTG CCGCCACTAA TGCAGTGGCC AATGCTGCCA ACCCAGACAA AACGGCCAAT
ACGGTTGCAG CGGCTCCTGC TGCGCCTGTA CCACAACTCT TTTTGAATCA AGTGGATAAA
TTCACATCCG ATCCAAACAA ATTCTACTTT GCGCTATCAC CAGCCCAAGA AGCGGCCGAT
GCCGCCGAGC ACTTATATCA AGATGGCGTC ACTATGCCAT TGCTGCTCGC CAGCAATGAT
GCCCTTGGCA AACGTATGGC CGAGAGCTTT ATTCAAGCGT GGAAAAAGAA GAGCGATAAC
GTCGTCGAAG TCTATTACTA CGATGGCGGC GACCAAATGA AAACCACAGT GCAAGATGCC
CTTGGCGTTC GTGATAGCCA AGCCCGTATC GCACGCATCA AGGAGCTGCT GGGTAACTCT
GTGCAGGCTG ACTTCCGCTC ACGCCAAGAT ATTGATGCTA TTTATATGAT TTCAACGCCG
CAGGATCTGA CTCTGCTCAA GGCCTTTATC GACGTTAACT TCAGCGTGTT CACTCAACCA
GTTCCCTTGT ATACCTCAAG CCGCAGCCGA GTTGAGAACG AAAGCACACA AACGGCGCAG
GATTTAAATA ACCTCACCCT CAGCGATGCC CCTTGGCTGA TGCAAAACGG CGAAGAAAAC
CTAATGGTTA ACACACTATT TTCGGGCTGG AATAACAGTC AGAAACGTTT GTTTGTTATG
GGTTATGATG CGATGGACTT GATCGGACGT TTAGCACAAA TGCGCTCATT TACGGGTTAC
CAATTCAATG GCCGCAGCGG CGCTTTATCG GTTAGCCCAG ATGGCATAGT AAACCGCCAA
TTAAGCTGGG GACGCTACCA AAGAGGCAGC TTCCGCCAGC TATGA
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| Protein sequence | MLKSLNTTKF VSVAILSVIL AGCGVSSPNS TGTTATLATS LASAPMAANV YLAQAANSKD
PQQRDTNLLL AAHAYINAND YAAAQKLLKS IQPSLTQSPT LLAEHKYLTA RVLEHTSTYS
DALKTLNYPS NWSLPSWQMT AYHQFKAHLY QLNKQPIEQV RELSLLTTYL PPAQANEVNN
TIWQVLQPMH EQTIKTFTQD AKSPVFAGWL QLAYIAKHYA VDPTQLVRYL GEWQKQNPYH
PAAAKLPADL DRALNAKPFT PKNIAVLLPL TGPRANAANA IRQGILASYM AKQNDKVAVN
FYDTANDAAS AYQQALMAGA EFIIGPLLPT EIEQLQVMNA ANTAATNAVA NAANPDKTAN
TVAAAPAAPV PQLFLNQVDK FTSDPNKFYF ALSPAQEAAD AAEHLYQDGV TMPLLLASND
ALGKRMAESF IQAWKKKSDN VVEVYYYDGG DQMKTTVQDA LGVRDSQARI ARIKELLGNS
VQADFRSRQD IDAIYMISTP QDLTLLKAFI DVNFSVFTQP VPLYTSSRSR VENESTQTAQ
DLNNLTLSDA PWLMQNGEEN LMVNTLFSGW NNSQKRLFVM GYDAMDLIGR LAQMRSFTGY
QFNGRSGALS VSPDGIVNRQ LSWGRYQRGS FRQL
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