| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4058 |
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| Symbol | |
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| ID | 5373028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4840467 |
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| End bp | 4841465 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640832321 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001368239 |
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| Protein GI | 153002558 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA AGCGTAGACC CACTCTTCAA GACGTTGCCG ATCAAGTTGG GATCACCAAA
ATGACGGTGA GCCGCTATTT AAAAAATCCA ACAAGGGTGG CGCAAAGCAC TCAAGAAAAG
ATAGCTATCG CGCTAGAAAC CTTAGGTTAT ATTCCTAATC GCGCGCCGGA AATTTTGGCG
CAAGCAACCA GCCGCGCCAT TGGCGTGTTA GTACCGTCGT TAACCAACCA AGTGTTTGCC
GAAGTGCTGC GCGGTATCGA GAATGTGACC GGCAAACGCG GTTATCAAAC CATGCTGGCT
CACTACGGAT ATCAAGCTGA ATTGGAAGAG GAGCGGGTGG CATCACTACT TTCTTACAAT
ATTGATGGCT TACTCTTGTC TGAAAGTTAC CACACTCCGC GTACCGTGCG AATGATTGAA
ACGGCGGGCA TTCCGGTCAT CGAAATGATG GATAGCGTGT CGCCTTCGAT TCAACAGTGT
GTGGGTTTTG ATAACACAGC GGCCGCATGC GAAATGGTTA AGGCCATGAT TGAAAAAGGC
TATCGCCACA TTGCTTACTT AGGCGCGCGC ATGGATATTC GCACTCAGCT TAAGATGCGA
GGCTACGAAT TAGCGATGCA GCAAGCCAAG CTCACACCTT TGACGATGAC CACCAATGAG
GCTTCGTCGT TTTCCTTGGG TGCGTCGTTA TTGCAACAAA CCTTAGCGAA ATATCCCTAT
GTGGATAGCT TTTTTTGCAC CAACGATGAT TTAGCGGCGG GGGTGATATT TGAGTGCCAA
AGACAAGGCA TTAAGATCCC TGAACAAATT GGCGTTGCAG GGTTTCATGG CCATGATATC
GGCCAATCTA TGACGCCAAA ATTGGCGAGC ATTATTACCC CGAGAAAAGA GATTGGTCGA
ATGGCTGCCA CTGAGTTATT AGACAGGTTA AATGGCAAAG AGAGAGCAGA ATCGGTTCTC
GATCTGGGCT ATCGTATTGA TTTAGGGGAA ACATTGTAG
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| Protein sequence | MNKKRRPTLQ DVADQVGITK MTVSRYLKNP TRVAQSTQEK IAIALETLGY IPNRAPEILA
QATSRAIGVL VPSLTNQVFA EVLRGIENVT GKRGYQTMLA HYGYQAELEE ERVASLLSYN
IDGLLLSESY HTPRTVRMIE TAGIPVIEMM DSVSPSIQQC VGFDNTAAAC EMVKAMIEKG
YRHIAYLGAR MDIRTQLKMR GYELAMQQAK LTPLTMTTNE ASSFSLGASL LQQTLAKYPY
VDSFFCTNDD LAAGVIFECQ RQGIKIPEQI GVAGFHGHDI GQSMTPKLAS IITPRKEIGR
MAATELLDRL NGKERAESVL DLGYRIDLGE TL
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