Gene Shew185_4027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4027 
Symbol 
ID5369499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp4812369 
End bp4813460 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content49% 
IMG OID640832292 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_001368210 
Protein GI153002529 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01123] branched-chain amino acid aminotransferase, group II 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATAA CTTACAATTT AAAACCTGCG TCCGAGCGCC GTACTGAGCA ATTCAAGCCC 
GAGGGGAATG TGGGCTTTGG TAGCCTCAGA ACCGATCATA TGTTTTTGAT GGATTATCAT 
GATGGAGAAT GGTGCGATCC GCGCATCGTT CCTTATGGTC CATTTGAAAT GGCACCGGGT 
GCAATGGCGT TGCATTATGG CCAGTCGATC TTCGAAGGCG CGAAAGCCTT TATGCACGAA 
GATGGCGAGA TTTATACTTT CCGCATTAAT AAGAATGCCG AGCGGATGAA TCGCTCCGCC 
GATATCGTCT GTATTCCTAA TATCGATGAA CAAGTGCAGA TGGATGCGAT CAATGCGTTG 
ATCGATGTCG ATCGCCTGTG GTTCCCGATG CAAGAAGGTG CGTGTCTGTA TATTCGCCCC 
TTTATTTTTG CGACCGAAGA CCGTCTCTCT GTTAGCCCAA GCACGCGTTA TACCTTCTGT 
GTGGTATTAA GCCCAAGTGG TGCTTATTAC GCAGCGGGCG TGAACAAAGG CATACGCTTA 
TTGATCAGCA AAACTTTCCA TCGCGCGGTA TCGGGTGGCA CTGGTGCCTC AAAAGCGGCG 
GGTAACTATG CGGCGTCGTT GCGTGCGGGT AAAGCCGCGG CAGCCTTTGG TGCATCGCAA 
GTGTTATATC TCGACTCGAC CAATCAACAG ATTGAAGAAG CGGGCGCGAT GAACCATTTC 
CACATATTAA AAGATGGCAC TGTGATCATT CCGACCTTCA CCGATACCAT TCTTAAGTCG 
ATCACCTCGC AATCCATCAT GGAATTGGGT GAGATGCTTG GTTGTGAAGT GCGCCAAGAG 
ACTGTCATGC TTGATCAATT TATCGCCGAT ATCGAATCTG GTGAAATTAT CGAAGCGGGT 
GGTTTCGGGA CTGCGGCTGT GGTTTCAGCT GTGGGTTCCT ACATTTTTGA AGATGGCCAC 
ATAGTCACTG TCGGTAATGG TGAAGTGGGC GAGCATGTTC AGCGCATCTA CAAACTGTAT 
ACCGAAATCC AAAAGGGCCA CATTCAAGGT CCTGAAGGCT GGGTTAAGCG TGTTGAACGT 
TTAGCAAAGT AA
 
Protein sequence
MEITYNLKPA SERRTEQFKP EGNVGFGSLR TDHMFLMDYH DGEWCDPRIV PYGPFEMAPG 
AMALHYGQSI FEGAKAFMHE DGEIYTFRIN KNAERMNRSA DIVCIPNIDE QVQMDAINAL 
IDVDRLWFPM QEGACLYIRP FIFATEDRLS VSPSTRYTFC VVLSPSGAYY AAGVNKGIRL 
LISKTFHRAV SGGTGASKAA GNYAASLRAG KAAAAFGASQ VLYLDSTNQQ IEEAGAMNHF 
HILKDGTVII PTFTDTILKS ITSQSIMELG EMLGCEVRQE TVMLDQFIAD IESGEIIEAG 
GFGTAAVVSA VGSYIFEDGH IVTVGNGEVG EHVQRIYKLY TEIQKGHIQG PEGWVKRVER 
LAK