| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4009 |
|---|
| Symbol | |
|---|
| ID | 5371163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 4784459 |
|---|
| End bp | 4786132 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640832275 |
|---|
| Product | acetolactate synthase 2 catalytic subunit |
|---|
| Protein accession | YP_001368193 |
|---|
| Protein GI | 153002512 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCAG GGCAGATGAT CAGAGGCGCA GACGCGGTAA TCAAAGTGTT GGCAGCACAT
GGAGTCACCA CAGTGTTTGG TTACCCAGGT GGTGCCATTA TGCCAATATA CGATGCCCTC
TATGGCAGCC CTGTTGAACA TCTGCTCAGC CGTCACGAAC AAGGCGCCGC CTTTGCTGCT
GTAGGATACG CAAGAGCCAG CGGTAAAACC GGCGTGTGCT TTGCGACCTC AGGCCCAGGC
GCGACTAACC TTATCACCTC ACTTGCCGAT GCGTTGTTAG ATTCAGTGCC TATCGTGGCC
ATCACAGGCC AAGTCTCCAC CGCCGTTATC GGCACCGATG CCTTTCAAGA AATCGACGTG
CTGGGCATGT CACTGAGCTG CACTAAGCAC AGTTTTATGG TGACAGACGT CAACGACCTG
ATCCCAACCT TGTATCAAGC TTTTGAGATC GCCGCATCCG GTCGCCCTGG CCCTGTGCTG
GTGGATATCC CGAAGGATAT CCAAATCGCC CAATTGGAAT ATCGCACCCC TTTGCTGGCT
GTGATGAGCG AACCCCAAGC CGAAATGAGT GATATCGACG CTGCCCGTGC ACTGTTGACT
GAGGCTAAAC AGCCTATGTT GTATGTCGGC GGTGGTGTCG GCATGGCTGG CGCGGTCGAT
CAACTGCGTG AGTTTATCAA AGTGACGGGC ATACCTTCGG TCGCGACCTT GAAAGGGCTG
GGCAGTATCG CCCACGGCAC GCCCGGTTAC TTAGGCATGT TAGGCATGCA TGGCGGCAAG
GCGGCTAACT TAGCGGTACA GGATTGCGAT TTGCTGATCG TGGTTGGCGC CCGTTTCGAC
GACCGAGTCA CCGGCCGTTT AGCGAGCTTT GCCGACAAGG CCAAAGTGAT CCATTTAGAT
ATCGACGCCG CCGAACTGGG CAAATTACGT ATGCCTGAGG TGGCAATCGC TGGTGACTTA
CGCCAAATCT TACCTGCCTT AGCCATGTCG ATGAACATCA CGCCTTGGCA GGCCGAGGTG
GAGCATTTAT CCCGTAAGCA TCAATGGGAT TATCAACACC CCGGCAGTTT GATCTATGCG
CCTGCGCTGC TGCGCCGCTT AGCCAATAAA TTACCCGAAG ACAGCGTAGT GTGCTGCGAT
GTGGGTCAGC ACCAAATGTG GGTGGCCCAG CATATGTGGT TCCGCCGTCC AGAAGATCAT
CTGTCCAGCG CGGGCTTAGG CACTATGGGC TTTGGCTTAC CTGCCGCCAT TGGTGCGCAA
GTGGCCCGTC CCGATGCCAC TGTAGTGACA GTATCTGGCG ATGGGTCTTT TATGATGAAT
GTGCAGGAAC TGACTACCAT CAAACGCCGC AAGCTGCCAG TGAAAATCGT GCTGGTTGAT
AACCAAAAGC TTGGCATGGT GAAGCAGTGG CAACAGCTAT TCTTTGAAGA ACGCTACAGC
GAAACGGATT TATCCGATAA CCCAGATTTT GTTTTATTGG CCTCCGCCTT TGATATCCCC
GGCCGCACGA TTTTCTCTTC CGACGAAGTG GAAGAAGCAT TAACCGAAAT GTTAGCAGCT
AAGGGCCCGT ATTTGTTACA CGTTGCAATC GACGATGCTT TTAACGTTTG GCCACTGGTG
CCCCCCGGCG CATCAAACAG CGATATGATG GACGAAATGG AGAAACAAAC ATGA
|
|---|
| Protein sequence | MEPGQMIRGA DAVIKVLAAH GVTTVFGYPG GAIMPIYDAL YGSPVEHLLS RHEQGAAFAA
VGYARASGKT GVCFATSGPG ATNLITSLAD ALLDSVPIVA ITGQVSTAVI GTDAFQEIDV
LGMSLSCTKH SFMVTDVNDL IPTLYQAFEI AASGRPGPVL VDIPKDIQIA QLEYRTPLLA
VMSEPQAEMS DIDAARALLT EAKQPMLYVG GGVGMAGAVD QLREFIKVTG IPSVATLKGL
GSIAHGTPGY LGMLGMHGGK AANLAVQDCD LLIVVGARFD DRVTGRLASF ADKAKVIHLD
IDAAELGKLR MPEVAIAGDL RQILPALAMS MNITPWQAEV EHLSRKHQWD YQHPGSLIYA
PALLRRLANK LPEDSVVCCD VGQHQMWVAQ HMWFRRPEDH LSSAGLGTMG FGLPAAIGAQ
VARPDATVVT VSGDGSFMMN VQELTTIKRR KLPVKIVLVD NQKLGMVKQW QQLFFEERYS
ETDLSDNPDF VLLASAFDIP GRTIFSSDEV EEALTEMLAA KGPYLLHVAI DDAFNVWPLV
PPGASNSDMM DEMEKQT
|
|---|
| |