| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3998 |
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| Symbol | |
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| ID | 5371728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4773043 |
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| End bp | 4773768 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640832264 |
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| Product | ABC-type amino acid transport/signal transduction system |
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| Protein accession | YP_001368182 |
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| Protein GI | 153002501 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCTTGA GTTTGCTGTT AATCTGCCTA TTAATCTTAC CAACGTATGC ATTTCCTGCC
TCGATAACTA TTGGTAGTGC GTTAAATCGC CCACCCTATA TTATCGAAGA TGCCGAATCG
GGACTTGAGA TTGATATTGT TAATGCCGCT TTTAAGGAAA TGGGCCAGTC AGTTAACTTT
AAATTTTACT CTCGTAAGCG CCAAGTCTTA TATTTCAACA AAGACAGATT AGATGCCGTG
ATGACCATGA ATCCCGCAAA TGGTGTCGAT GGCTATTGGT CTAATGATTA TGTCGACTAT
ACCAATGTGG CGATTAGCTT GGCTGCGCAA CACCTTGAAA TAAAAAGTAT TGCCGATCTA
AAAAACTACA GTATTGCGGC CTTTGAGAAT GCCCGACTAT TGCTCGGCGC TGAATTTAAT
GCCGTAGCGC AACAGACGAT TTATCGCGAA GTTGATACTC AACTAAGCCA GAATCGTATG
TTGTACTTAG GTCGGATTAA TACTGTGATT GCCGACCGTT ATATCTTCAC TCAATTGAAT
CGGTTTGTTG AGCCCAATAT CGACACCCAG CAAGCATTGA GCTATCACTT TATTTTCCCG
CCGACATCCT ATCGCATGGT ATTCCACAAC TCAGTGGCGC GGGATACTTT TAATCAAGGG
TTGGCAAAAA TTAAGGCCAA TGGGATTTAT CAGACCTTAG TGGTCAAATA CTTAGGCAGT
GCTTAG
|
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| Protein sequence | MRLSLLLICL LILPTYAFPA SITIGSALNR PPYIIEDAES GLEIDIVNAA FKEMGQSVNF
KFYSRKRQVL YFNKDRLDAV MTMNPANGVD GYWSNDYVDY TNVAISLAAQ HLEIKSIADL
KNYSIAAFEN ARLLLGAEFN AVAQQTIYRE VDTQLSQNRM LYLGRINTVI ADRYIFTQLN
RFVEPNIDTQ QALSYHFIFP PTSYRMVFHN SVARDTFNQG LAKIKANGIY QTLVVKYLGS
A
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