Gene Shew185_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3939 
Symbol 
ID5369802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4684682 
End bp4685563 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content48% 
IMG OID640832201 
Productnicotinate-nucleotide pyrophosphorylase 
Protein accessionYP_001368123 
Protein GI153002442 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID[TIGR00078] nicotinate-nucleotide pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAAA ACGATATTCG CCAGTCAGTA AAATCCGCAC TCAGTGAAGA CTTAGGCGGC 
ACCGAAATCA ACGATCAAAC CAAGGCCATC GCTTATGGTG ATATCACAGC AATGTTGATC
CCTGCTGAAA AGTACGCTGA AGCCACCCTT ATTACCCGTG AAGAAGGCGT TTTTTGTGGA
AAAGCATGGG CAGAGCAGGT TTTTAATCAA CTCGGTGGGG AAGTCGCACT GCATTGGCAT
GTGGATGATG GCGATCTGGT GTTACCTAAC CAACTACTGT GTGAACTCTC AGGCCCAGCA
CGCACGATTC TCACCGGCGA ACGCACGGCA ATGAACTTTA TCCAAACCCT GTCTGGCGTT
GCGACCTTAA CTAAGCATTA TGTCGATAAA CTGGTGGGTA CTCACACTCG CCTATTAGAT
ACTCGCAAAA CCATTCCTGG CCTGCGCACC GCCCAGAAAT ATGCTGTCAC CTGCGGCGGC
GGAAAAAACC ATCGTATTGG CTTATATGAT GCTTTCTTGA TCAAAGAAAA CCACATTATG
GCCTGTGGTG GCATTCGCCA AGCCGTAGAT ACCGCCCGCA GCTTGTACCC GAACAAACCC
GTTGAAGTCG AAGTGGAATC ACTCGAAGAG CTCGCCTTAG CACTCGACTC TGGCACAGAT
ATCATCATGT TAGATAACTT CGACATCACT AAAATGGTCG AAGCGGTTGA AATGAACAAT
CAATATAAAG CGAAAGGCGC CGGCGCTAAG CTTGAAGTCT CCGGCAATGT CACCTTAGAC
ACCTTAACCG AATTTGCCAA AACTGGTGTC GACTATATAT CAGTTGGTGC ACTCACTAAG
CATGTTCGCG CCCTAGACTT GTCGCTTCGA TTGAAAGCTT AA
 
Protein sequence
MLENDIRQSV KSALSEDLGG TEINDQTKAI AYGDITAMLI PAEKYAEATL ITREEGVFCG 
KAWAEQVFNQ LGGEVALHWH VDDGDLVLPN QLLCELSGPA RTILTGERTA MNFIQTLSGV
ATLTKHYVDK LVGTHTRLLD TRKTIPGLRT AQKYAVTCGG GKNHRIGLYD AFLIKENHIM
ACGGIRQAVD TARSLYPNKP VEVEVESLEE LALALDSGTD IIMLDNFDIT KMVEAVEMNN
QYKAKGAGAK LEVSGNVTLD TLTEFAKTGV DYISVGALTK HVRALDLSLR LKA