| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3867 |
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| Symbol | |
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| ID | 5372979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4590607 |
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| End bp | 4591965 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640832128 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_001368054 |
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| Protein GI | 153002373 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCCCAA TCTGCTTGCC CGCCGTTAGC GCAATCATAC CTTATCTGCT TTTGCTGAGT
TTTCGGGCGT TTAACATGCA TAAAATCACT TCATATTTAT TTTTAGATGA ACAGGCTAAA
AAACTAGTTG ATCAAGTGCA TGGCACATCC ATAGACCTGA CTTTTTCTGA AGCGGCTATA
TTGGTACGCT TGTTATCTTC CCCCAACGCC ATATTGACGA AAGAAGCCTT GTTGCAGGTG
GGTTGGCCAG ACCGCGTCGT GGCACCGACT TCACTAACAC AGTGCATCAG CACCCTAAGA
AAAAAACTCG AGCCTTATAC TGAAGTACAG CTCAAAACCG TGGCGCGCCG CGGTTATCAA
TTGCATATTG CTGAGCAATC CCATGTAAAG ATGTTGGCTA TAAACGATGC AGATGCAATC
CGTGATGCTT TAGTTGGGGT ATCGGCTTGG ACCAAATTTG CAGGTATTGC TTTCTTGGGC
CTGATCTTGG CGATCTTCTG GTATATGAGT GATCACCATG CGGTGGTTAA ACAAGTGGCT
AAGTGGCATG CAGATAAATA CATCAGCCTC AATATCGGTG GAACTCTGGG AACGGCGCAA
ACTTTCTATA TTGGCGATGA GGAGCATTTA CATCCGTCTT GGTGGCAAAA ACATTTGGCG
CCAGAGGGAA ATCATATCAG CAGTATTAAG CATTTTAGTG CTTTTGCAGC CACGGATGGT
AAAAACTATT CCATGGCAAT TTGTCCAGAG CTAGATGCAG AGGCTTGTAA TGGTCGCGGT
ATGATTAATA TCACCGCAAT AGATGCGAAA CCTGCAGGCT TAAATATGAC GGAATTTATT
CCGCTGAGTC AAAAGATGGA GCAGCGGATT CGTTATAACC GCATTGTTCT CCCTGCGGAT
GACAAGGGTA AGGGGGAGTT AGTTGAGCAT AATTACCATG CGGATATCTA TTTTCCTGTC
GCGGGTGAAC TCTTAGTTCG GAACGATCTC AGCATGTCTC TGGTGTATGA AGGGGAGAAT
CGGGGAAATT TCTATTCAAC CTCTTGTATA ACAGATCAAG ATTGCTTAAC GACACCGATT
AAGTACACGA TCCGCGGTGA GTTTGAACAG TACCAAACTG AGATTAATGA TCTTAAAGTC
GATATTTTCT ACGTTAAAGT GTTACAAAAA GAGCTGACAA AACCGGATGA AGTGAGCAAT
TCTGCCATGC AGTTTTATCG TGAAATTCGT AAGCATGATA TCCGCGATGA AGAATTATTC
TATTATCGTG TTTATCAAAA TGAGCATACG GCGGTATGGA TTATTCCTCA AATGGGACAA
GTGCTTGCAT GGACTCAGTA CAATCAGCTC AAGTTATAG
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| Protein sequence | MVPICLPAVS AIIPYLLLLS FRAFNMHKIT SYLFLDEQAK KLVDQVHGTS IDLTFSEAAI
LVRLLSSPNA ILTKEALLQV GWPDRVVAPT SLTQCISTLR KKLEPYTEVQ LKTVARRGYQ
LHIAEQSHVK MLAINDADAI RDALVGVSAW TKFAGIAFLG LILAIFWYMS DHHAVVKQVA
KWHADKYISL NIGGTLGTAQ TFYIGDEEHL HPSWWQKHLA PEGNHISSIK HFSAFAATDG
KNYSMAICPE LDAEACNGRG MINITAIDAK PAGLNMTEFI PLSQKMEQRI RYNRIVLPAD
DKGKGELVEH NYHADIYFPV AGELLVRNDL SMSLVYEGEN RGNFYSTSCI TDQDCLTTPI
KYTIRGEFEQ YQTEINDLKV DIFYVKVLQK ELTKPDEVSN SAMQFYREIR KHDIRDEELF
YYRVYQNEHT AVWIIPQMGQ VLAWTQYNQL KL
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