| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3820 |
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| Symbol | |
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| ID | 5371797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4536786 |
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| End bp | 4538519 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640832081 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001368007 |
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| Protein GI | 153002326 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAC TACTGATCGA TGATGATGAA GTCGATAGAA CGGCAATTAT CCGAGCACTT
AGGCAGTCAA AGTTGACGTT TAATGTGATC GAAGCCAATT GTGCATTTGA TGGTTTGAAT
CTTGCCTTAG AACGTCATTT CGACGGCATT CTATTGGATT ATTTATTGCC CGATGCCAAT
GGGTTAGAAG TGTTAATTAA GCTCAATGCC ATGACGCAAG ATCAGACTGT GGTCGTGATG
CTGAGTCGCT ATGAAGATGA GAAACTGGCC CAGCGCTGCA TTGAATTAGG TGCGCAGGAT
TTTCTGCTTA AGGATGAGGT TAACTCGCGG ATCTTAACCC GTGCGATTCG CTACGCGAAA
CAAAGATCTT CAATGGCATT GGCGTTACGG AATAGCCATC AAAAACTAAA AGAACTGGCC
GAGCACGACT CGCTCACTAA GTTGGTTAAT CGCTATGGTT TTGAACTGTG TCTTAATCGA
GCGATTGCAA GGGCGAAACG CTGTCACGAT TATTTGGCGG TTATCTTGCT GGATCTCGAT
GATTTCAAAG CGATTAACGA CACCTTAGGC CACCAAACGG GTGATGTGCT GTTACTCAAA
GTGGCGGCTC GATTAAGTGA GGTGCTGCGA GATGGCGACA TTATTGCCCG TTTAGGCGGT
GACGAATTTG TCGTCCTGGT GACAGATAAC GATTATAAAT ATTTCCCCAT GATAGTGGCC
AATCGACTGC TCAAAGTCTT TGAGGATGAA TTTTGCCTCG GTGATAACGA TGTGCTTATC
GGTGCCAGTA TCGGTGTGGC TTTTTATAAT GAAGCGGCTT CGAACAGTTC TGAGCTGATG
AAATGCGCCG ATATCGCCAT GTATCGTGCT AAAAAGATGG GCCGAAACCA GATCCAGTTT
TATTCCGAAG CCTTAGATAA AGAAGTACGC TACCGCAATC ATATCGAATC AAGTTTGCGT
ATGGCCTTAA AAAGAAATGA ATTTAAGGTC CATTATCAAG CACAGGTTAA TGCGAAAACC
CATCAGCTGG TGGGGATGGA AGCCCTTATC CGATGGCAGC ACCCAGTGGA TGGTATTATC
GCTCCAGATC AATTTTTGCC CATAGCCGAA GAAATTGGAT TAATGGATGA CATTGATGAT
TGGGTACTTG AACAAGCCTG TACCCAGGCA CAGGTTTGGT TAGCCCAATT ACAGCCCCTA
GGCCAAGAAT TCACTATCGC AGTAAACCTT TCAGCCTCTC AAATTGGAAA TGAGAACCTG
TTTGATAAAA TCGTGCATAC ACTGACGAAG ACAGGCCTGC CTGCTGGAGC ATTAGAGCTT
GAAATTACAG AAAATTGCCT TATTGAAGAT CCCCATGAAC ATGCCAAAGT GCTCGATAGA
ATCGCCGGAT TAGGGGTGCG TTTTGCCCTC GATGACTTCG GGACGGGTTT TTCGTCATTA
GAACACATCA AACTGTTTCC GATCAGCGTA CTGAAAATCG ATAAAAGCTT TGTCGCTTCC
TACGATAAGG ATGAAAAAGA TACCCGATTG CTCGCCGCTT TACTCAACTT TGCCTATGGG
TTTAATGTTA TTTCTGTGGC GGAGGGTGTT GAAACGTTTG AGCAAGCAGA GTTTTGCACT
GCTCGCCATT GCACTGTTTT ACAAGGGTAT TTGTTCTCGC GCCCCTTAGA TGCCGCGGCG
TTTGAGGCCA AGTATATTCT GCCACTACTA ACCCAAACTC AGCTCCCAGT GTGA
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| Protein sequence | MDLLLIDDDE VDRTAIIRAL RQSKLTFNVI EANCAFDGLN LALERHFDGI LLDYLLPDAN
GLEVLIKLNA MTQDQTVVVM LSRYEDEKLA QRCIELGAQD FLLKDEVNSR ILTRAIRYAK
QRSSMALALR NSHQKLKELA EHDSLTKLVN RYGFELCLNR AIARAKRCHD YLAVILLDLD
DFKAINDTLG HQTGDVLLLK VAARLSEVLR DGDIIARLGG DEFVVLVTDN DYKYFPMIVA
NRLLKVFEDE FCLGDNDVLI GASIGVAFYN EAASNSSELM KCADIAMYRA KKMGRNQIQF
YSEALDKEVR YRNHIESSLR MALKRNEFKV HYQAQVNAKT HQLVGMEALI RWQHPVDGII
APDQFLPIAE EIGLMDDIDD WVLEQACTQA QVWLAQLQPL GQEFTIAVNL SASQIGNENL
FDKIVHTLTK TGLPAGALEL EITENCLIED PHEHAKVLDR IAGLGVRFAL DDFGTGFSSL
EHIKLFPISV LKIDKSFVAS YDKDEKDTRL LAALLNFAYG FNVISVAEGV ETFEQAEFCT
ARHCTVLQGY LFSRPLDAAA FEAKYILPLL TQTQLPV
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