Gene Shew185_3796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3796 
Symbol 
ID5370982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4515430 
End bp4516173 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content46% 
IMG OID640832057 
Product1-acyl-sn-glycerol-3-phosphate acyltransferase 
Protein accessionYP_001367983 
Protein GI153002302 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.782536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTTTAA TCGTCAGATC AATGCTGTTG GCGGTGTCAT TGTTGCTTGC CTTTATTTTT 
GGTGGCTTAG TGTGTTTATT AAGACCTCGG CACCGCGACA ATGTACATAT GTTCGCCAAG
ATCTTCTCAT CGGTCGCTCC GATCCTTGGG ATCAAAGTGA TTGTACGTCG ACATAAAGAT
GTGCAGGATG GCCCCTATAT TTTCCTCGCA AATCATCAGA ATAACTTCGA TCTGTTTACT
CATACGACAG CGGTACCTAA AGGCACTGTG AGTTTGGGCA AAAAGAGTTT GGCGTGGATG
CCATTATTCG GTCAAATCTA TTGGTTGTCA GGAAATATTC TGATCGACCG TAAAAACCGT
CATAGTGCCT TTGATACTAT GGCGAAAACC GTGGAAAAAA TTAAACAGAA GAATTTGTCT
GTGTGGATTT TCCCTGAAGG GACACGTTCA CGTGGTCGCG GTTTGTTACC TTTTAAAGCG
GGCGCTTTCC ATACTGCGAT TGCGGCGGGA GTGCCTGTTG TGCCGGTATT GGCCTCGTGC
CAAAGCCACA TTAAGCTCAA TCGCTGGAAT AACGGTGTAG TCATTATCGA TATGATGGCA
CCTGTGCCGA CCGCAGGTTT AGATAAAGCA GATGTGAAAA ACTTCTCTGC GCAAATTCAT
GCCAGCATGT CGGCGAGATT TGCTGAGATA AATCAAGAGG CGGCAGCACT TATGGGTAAA
ACTCTCGCGA GTGATGACGT ATAA
 
Protein sequence
MLLIVRSMLL AVSLLLAFIF GGLVCLLRPR HRDNVHMFAK IFSSVAPILG IKVIVRRHKD 
VQDGPYIFLA NHQNNFDLFT HTTAVPKGTV SLGKKSLAWM PLFGQIYWLS GNILIDRKNR
HSAFDTMAKT VEKIKQKNLS VWIFPEGTRS RGRGLLPFKA GAFHTAIAAG VPVVPVLASC
QSHIKLNRWN NGVVIIDMMA PVPTAGLDKA DVKNFSAQIH ASMSARFAEI NQEAAALMGK
TLASDDV