| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3786 |
|---|
| Symbol | |
|---|
| ID | 5371548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 4497340 |
|---|
| End bp | 4499148 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640832047 |
|---|
| Product | protein kinase |
|---|
| Protein accession | YP_001367973 |
|---|
| Protein GI | 153002292 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAAACAC CTCAACTGCA GCATTTTTAT ATTTCTGAAG AGCAATCCAT TTACTTGCTC
AAAGCCAATG ATGCCCGTAA ACACAAGGCG TGGATCCGCC TCTGTAAACA GCAGCTGAGC
AAGTTAGGTT ATACCGATAT CGAATTGGTC GGCAAAGGCG CCTACGGTTT CGTGTTTGCG
GGTATCAATC AAGCGGGCGA TGCCCATGTG TTTAAGTTCT CGCGGATTAA TCTGCCGCAA
CATATTCAAG ATAGGCTCGA AGAAGAAGCC TTTATGCTGT CCTTACTCAA GCATCCCAAT
GTGCCGGGCG CGATCAAATT TGAGCGAGTC GGCAAGCAAG GCATACTCGT GATGGAGCGG
GCAAAAGGCG AAGATCTCGA CCAACTTTGC CGCCGTATGG GCGCCCTGCC CACAGCTATG
GTCATGAGCA TCGCCCGCCA ACTCGCCGAT ATCTTGTATT ACCTGCGCAC GGGCAAGCCC
TTAGTGCACG GCGATATCAA ACCTTCGAAC CTGGTTTACG ACATTGAGCA GCAACACTTA
TCGTTGATCG ATTGGGGATC GGCGGTGTTT GCCCAGAGGG ATGAACATAA CAAGCCTGTC
GAAGACAATG TGATGGCGTT AATGTCGAGC GATCAACAAC ATACCAACGC ACGTATGGGC
GATGTGTACT TTATCGGCGA AGAGCAACTC AATGGGGCAC TCTCCAGCCC GCGCTTTGAC
GAACAAGGCG TTGCTGCAAC TCTGTATGCT CTTGCCTCAG GCCAAGCAAG CCGCTTCGGC
GCACAAGTTA TCTCGCCCGC CAGCATTGGC TTACCAATGG AATTAGCCCG TACCTTAGAG
GGCATGCTCA GCACAGATCC TAAGCAGCGC AACATTGCCG GCGATTACTT TTTGAAAAGT
ATGCGCCACA GCCACAGACT GCATTTACCA GAACTGCCCA AAGCTGAGTT ACAGGGTGAA
ATCCCTGTGT GGGTGCAATC CCGCGACAAA GATGTTGAAA CCGTCAGCTA CAGCTCGCGT
AAGTCCTTTT TGAAGGAACA TAACGCCCAA GATCCTATCG CTAAGATGGA TGATATTCAG
CTCGAAAAAT ATTACCGCAA CTTCCTCGCG GGCATGGGCG ATACCGAAAA AGGTTTTATC
GCCGCAGTGG GTCGGTTAGC GCAATATCCA ATCGTGGGCG GTCTCGCGAT CCACTGGCAA
GAAACCGGCG TGTTTATCGA CTCCAATCTT GCGATTTACG ATGCAAAACA AAAAAGTGCC
TTAATTATTG CGGTCAACAA TATGGTAGAT CTGGCGCGGG GAATTAAACG TATCGGGGTG
TTTAAGGCCT GTTTCTTTAA CGCCAAAGAC ACGCTGCATA TCGAGCGAAC AGATATCAGC
GAGCCGTTTG TTGCCAGCGC CGATCTGCAA TTGCCCTTTG AAGTCGGTGA TGTGCCCACC
TTAGAAGATA AGTCACGGTT ACACTCTTAC TTTGAAGACG GTAAAGATCC CGACGAAAAC
CTCGAATTGC CGGTGGAGAT CATGGAAGAA TTAGCCCGCA TCAACCAAAT TCACCACACA
GGCTGCATCA TTTTCGAGGC ACTGCCGAAT CACTTGAAAA TCCACAGTTA CTTGAAGCTG
CTCAACCCCC GTAAGCAAGC GGCGTTTCGC GCCAGTCTAG ATCGCATCTT GCATCATGTC
GGCAAAATCC AAGGCCACGG CGTGTCGGGC TTTATGAAAC TACCCTACAA AAACACCCGC
CGCTTTACCC ATCTAGAGCG TAAAGCCGAT CACTTTTATC CGAAAAATCC AAAAGAAATA
GGCGCCTAA
|
|---|
| Protein sequence | MQTPQLQHFY ISEEQSIYLL KANDARKHKA WIRLCKQQLS KLGYTDIELV GKGAYGFVFA
GINQAGDAHV FKFSRINLPQ HIQDRLEEEA FMLSLLKHPN VPGAIKFERV GKQGILVMER
AKGEDLDQLC RRMGALPTAM VMSIARQLAD ILYYLRTGKP LVHGDIKPSN LVYDIEQQHL
SLIDWGSAVF AQRDEHNKPV EDNVMALMSS DQQHTNARMG DVYFIGEEQL NGALSSPRFD
EQGVAATLYA LASGQASRFG AQVISPASIG LPMELARTLE GMLSTDPKQR NIAGDYFLKS
MRHSHRLHLP ELPKAELQGE IPVWVQSRDK DVETVSYSSR KSFLKEHNAQ DPIAKMDDIQ
LEKYYRNFLA GMGDTEKGFI AAVGRLAQYP IVGGLAIHWQ ETGVFIDSNL AIYDAKQKSA
LIIAVNNMVD LARGIKRIGV FKACFFNAKD TLHIERTDIS EPFVASADLQ LPFEVGDVPT
LEDKSRLHSY FEDGKDPDEN LELPVEIMEE LARINQIHHT GCIIFEALPN HLKIHSYLKL
LNPRKQAAFR ASLDRILHHV GKIQGHGVSG FMKLPYKNTR RFTHLERKAD HFYPKNPKEI
GA
|
|---|
| |