Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3781 |
Symbol | |
ID | 5373806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 4492615 |
End bp | 4493550 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640832042 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001367968 |
Protein GI | 153002287 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGCACA AGTTACTCTT GCTAACGAAG GCAAATCAAC AGTATCGCGA TTTGCTTGAG GCGCAGAAAC TCCCTGATTT AGAGATACTC GACGATAATC CAGCGGGCAT AATTGATGCT GATATTTGGT TAGCCGAACC TAAACTCGCC GCGCCCCTAT TACCCCATGC TAAAAATCTG CAATGGTTAC AATCAAGCTT TGCTGGCATA GATGCTCTGA TGAGCCCAAG GGGCAGAAAA GACTATCAAC TCACCAATAT TAAAGGTATT TTCGGCCCGC TGATGAGTGA GTTTGTGTTC GGTTACTTAC TCGCGCATAT CCGTGGTCAT GGTTTTTATC GCCAGCAGCA ACAGCAAAAA CAGTGGCAAG TTCAACCACC CATACGTCAC ACAAGTTTAC AAGGAATGCG ATTACTCTTA CTCGGTACTG GCTCAATTGC CCAGCATCTC GCGAAGACGG CAAAGCACTT TGGCATGCAT GTCACAGGGA TCAATCGTAG TGGTAATACC GTTGAAGGTT TTGATGCCAT TGAAGCGATG GCCAATTTAG CCCAGACGTT AACGCAAGCC GATGTGGTGG TGAATTTACT GCCCAGCACT CCGGCAACCC AGAACCTGCT TAACGCTGAA ACCTTAGGCA GGCTAAAAGA TGATGCAGTG CTGTTTAACG TCGGCCGCGG TGATGCACTC GATCTCAATG CGCTCAATAT CCAGCTTATC GCTAAACCTA GTCAGCAAGC GATCCTCGAT GTTTTTGCTC AAGAACCTTT GCCCAATAGC CATCCCATTT GGGAGCGGGA AAATGCCATC ATTACGCCGC ATATTTCTGC GCCAAGCCAT CCCGCACAAA TCGTCGAGAT TTTTAGCCAA AACTATCGCC GCTACATTAG CGGTGAGCCA CTGCAGAATC GAATCGACTT TAGTAAGGGC TATTGA
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Protein sequence | MGHKLLLLTK ANQQYRDLLE AQKLPDLEIL DDNPAGIIDA DIWLAEPKLA APLLPHAKNL QWLQSSFAGI DALMSPRGRK DYQLTNIKGI FGPLMSEFVF GYLLAHIRGH GFYRQQQQQK QWQVQPPIRH TSLQGMRLLL LGTGSIAQHL AKTAKHFGMH VTGINRSGNT VEGFDAIEAM ANLAQTLTQA DVVVNLLPST PATQNLLNAE TLGRLKDDAV LFNVGRGDAL DLNALNIQLI AKPSQQAILD VFAQEPLPNS HPIWERENAI ITPHISAPSH PAQIVEIFSQ NYRRYISGEP LQNRIDFSKG Y
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