| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3763 |
|---|
| Symbol | |
|---|
| ID | 5373253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 4471756 |
|---|
| End bp | 4472346 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640832020 |
|---|
| Product | ubiquinol-cytochrome c reductase, iron-sulfur subunit |
|---|
| Protein accession | YP_001367950 |
|---|
| Protein GI | 153002269 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0723] Rieske Fe-S protein |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000000317933 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATG CGCCAGTCGA TACCGGACGT CGCAGATTCC TGACAGCCGC AACCGCCGTA
GTAGGTGGTG CTGGTGCCGT CGCTGTAGCG GTTCCTTTCA TCAAGTCATG GAATCCGAGT
GCCAAAGCGA AAGCTGCAGG TGCACCGGTC GAAGTAAATA TCAGTAAAGT AGAGCCAGGT
CAGCTGATCC GTGTTGAGTG GCGTGGAAAA CCTGTATGGG TTGTCCGTCG CACAGATGCT
GTGATCAATG AACTGCCAAC ACATGATGAT AAGTTAAGAG ATCCAGCTTC TGCCGAAATG
CAGCAGCCTG ATTATGCAAC AAATCCTTTG CGCTCAATTA AGCCAGAGTA TTTTATTGCT
GTCGGTATTT GTACCCACCT CGGATGTTCA CCTACTTATT TGCCAGATTC ATTTGGTGAG
CAAGTTGAAG GTGTCACTTC TGGTTTCTTC TGTCCATGTC ATGGCTCTAA GTTCGATATG
GCTGGTCGCG TGTTCCAAGG CGTACCTGCT CCATTGAACC TAGTTATCCC TCCACATCAA
TACGTTGATG ATGGCACCGT GATTATCGGT GTAGATAAAG GAGTGGCGTA A
|
|---|
| Protein sequence | MSNAPVDTGR RRFLTAATAV VGGAGAVAVA VPFIKSWNPS AKAKAAGAPV EVNISKVEPG
QLIRVEWRGK PVWVVRRTDA VINELPTHDD KLRDPASAEM QQPDYATNPL RSIKPEYFIA
VGICTHLGCS PTYLPDSFGE QVEGVTSGFF CPCHGSKFDM AGRVFQGVPA PLNLVIPPHQ
YVDDGTVIIG VDKGVA
|
|---|
| |