Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3745 |
Symbol | |
ID | 5369732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 4452750 |
End bp | 4453295 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640832002 |
Product | 2'-5' RNA ligase |
Protein accession | YP_001367932 |
Protein GI | 153002251 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.877647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAAA GGCTATTTCT CGGCTTCGCG CCTACCGCTG CACAAATGAC AAGGCTGAGT GATGTACAAC AGCAGCTAAT TTGTCACCTC AATCCTGAGG CGAAAGCGGT TAGCGTCAGT AATATGCATT TAACGCTCTG CTTTTTAGGG CAAGTTGACG ACGAGCAACG CATCGCACTC CTTGATGCGA TTGACTGCTT AGCTAAGCCT AGATTCAGCG TTCAACTTAA CCAGCTCGAC TTATGGCCCA ATGCCCAAGT CTGTTGCTTG AAAGGCGATG AAGTTGAGCC GCCGTTAGCG CAATTAGCTA AGCAGACGCA AGCAATCGCA GGCCGCCTGC AATTGCATAG CAGTGAACAC CACTTTTGCC CGCACATCAG TTTATTCAGG AAGGCAAAAC AATGGACGCT AGATGAGTCG GCGTTATTGC AACTCAAGGA CATGAATACG CTAACGTTAA CGCCCGAACG TTTGCATTTA TATCATTCAA AAAACACAAG CACGGGTGTG GAATATCACA TCCTACATTC TTGGACGCTC GATTAG
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Protein sequence | MQQRLFLGFA PTAAQMTRLS DVQQQLICHL NPEAKAVSVS NMHLTLCFLG QVDDEQRIAL LDAIDCLAKP RFSVQLNQLD LWPNAQVCCL KGDEVEPPLA QLAKQTQAIA GRLQLHSSEH HFCPHISLFR KAKQWTLDES ALLQLKDMNT LTLTPERLHL YHSKNTSTGV EYHILHSWTL D
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