| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3534 |
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| Symbol | |
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| ID | 5373043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4204298 |
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| End bp | 4205047 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640831794 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_001367724 |
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| Protein GI | 153002043 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTATGC AATTGGGAGG CTGCAGGTTT GATCGAGAAC GAGGCATGCT GATTGAGTTG
TCTCGCGATG AATCTTGGCA TCTTTCTCGG GCCGAGTTAC AAGTGCTCAC GTTATTGCTT
GAACACCAAG GTCAGTTAGT TTCAAAGCAC ATGCTAAAAA CGGGGGATAG ACAAGGTCCG
CCATTAACCG ATGCCTCTGT GTCCCGCGCC ATATCCACGC TCCGCTCCTT TCTTGGCCCT
CAGCACGAGG GCTTGATCGA AACCGTTAAA GGCCAAGGTT ATTTGTTGCG GCCATCAAAC
GGCAGCGAAT ATCGAGGCGT CAATTACCTC AGACTACACA CTGTGCCTTT GTGGAGTGCC
TTAGTGTTAT TCGGGGTGAT GTTGGCATTT TCGGTGTTTT ATCTGAAACA CACAGATCAC
AGCAAGCCGA CCCAAGCCTT GATGACGTCG ATACTGTCGT TAGCCTCGGG TCAGCAAGTG
CGCTTGAACT TATATGCCGA CTCCGGTGCG AGTAACACCT TACTGTTCGA AATGGGCGAG
CGCTTAAGTG CGGGCCTCAT TGCCTGTGGC AAGAGCGATT GGGCGGATGT TTATGCATCT
TTATCCCATG ATAAACAGGT GCTTAATATG ACGTTTCGCG GTGAAAAATT CGACCAGTCA
GTGCTCCGCA ATATTAGCAT CAGCGATTTT TCTCGACCCA AAGCATTCAT CGACTCCGCT
TGGCTGCGCG AGGTGGATAT CTGTGGCTAA
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| Protein sequence | MCMQLGGCRF DRERGMLIEL SRDESWHLSR AELQVLTLLL EHQGQLVSKH MLKTGDRQGP
PLTDASVSRA ISTLRSFLGP QHEGLIETVK GQGYLLRPSN GSEYRGVNYL RLHTVPLWSA
LVLFGVMLAF SVFYLKHTDH SKPTQALMTS ILSLASGQQV RLNLYADSGA SNTLLFEMGE
RLSAGLIACG KSDWADVYAS LSHDKQVLNM TFRGEKFDQS VLRNISISDF SRPKAFIDSA
WLREVDICG
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