Gene Shew185_3512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3512 
Symbol 
ID5369381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4177960 
End bp4178505 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content46% 
IMG OID640831772 
Producthypothetical protein 
Protein accessionYP_001367702 
Protein GI153002021 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATC AAATCCTGCT TGCCTGTATT TATCTTGCAG TGTTTCTCTT TTTACAGCGC 
GCCTTAACCC ATTGGGTGAG AAAACTGGCG CAAATGAAGC AAGTGAGTGT GGCGCGGACC
AGTTTAGTCA CCCGTTTTAT TTCCTATGTG ATGTTTTTTA TTACCTTGTC ACTGATGGCT
GTCTCGCTTG GGCTGGGCTA TCAGGATGTG TCGCTATTTG TTTCATCTGC CTTCGCTGTA
ATGGGCGTGG CATTAGTCGC CCAGTGGTCG ATATTGAGTA ACTTAACCGC AGGCGTACTG
ATCTTTTTCG TGTTTCCTTA TCGTATCGGC GAGCGTATTC GAGTGGTTGA TAAGGATGAA
GATATTAGCG GCGTGATCAT CGAAATCGCG TTATTCCATG TGCTGATCCA TCGCGATAAT
GGCGATACCA TTACTTATCC CAATAACTTG ATGCTGCAAA AGGCAGTGTT AAAGCTCGCC
GATCAGACTC CCTTGGCCGA ACGTCAGGCG TTACTCGAAG GCAAGAAGAA GTTTGATCCT
GAGTAG
 
Protein sequence
MTNQILLACI YLAVFLFLQR ALTHWVRKLA QMKQVSVART SLVTRFISYV MFFITLSLMA 
VSLGLGYQDV SLFVSSAFAV MGVALVAQWS ILSNLTAGVL IFFVFPYRIG ERIRVVDKDE
DISGVIIEIA LFHVLIHRDN GDTITYPNNL MLQKAVLKLA DQTPLAERQA LLEGKKKFDP
E