Gene Shew185_3411 details

Gene Information

• Locus tag: Shew185_3411
• Symbol: dnaK
• ID: 5369919
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 4049545
• End bp: 4051464
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640831671
• Product: molecular chaperone DnaK
• Protein accession: YP_001367601
• Protein GI: 153001920
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000382343
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAAAA TTATTGGTAT CGACTTAGGC ACAACAAACT CTTGTGTAGC TGTCCTCGAT 
GGTGGCAAAG CACGTGTGTT AGAAAACGCT GAAGGCGATC GCACAACCCC GTCAATCATC 
GCTTATACAG ATGATGAGAC CATTGTCGGT TCGCCAGCAA AACGTCAAGC TGTGACTAAC 
CCGACTAACA CATTCTTCGC GATTAAGCGT TTGATCGGTC GTCGCTTTAA AGATGACGAA 
GTCCAACGTG ACGTGAACAT CATGCCATTC AAAATCATTG CAGCCGACAA CGGTGACGCA 
TGGGTTGAAT CGCGTGGCAA CAAGATGGCT CCACCACAAG TTTCTGCAGA AATCTTGAAA 
AAGATGAAGA AAACCGCAGA AGACTTTTTA GGTGAAGAAG TAACAGAAGC GGTTATTACT 
GTTCCTGCTT ACTTTAACGA TTCACAACGT CAAGCGACTA AAGATGCGGG TCGTATCGCA 
GGTCTTGATG TTAAACGTAT TATCAACGAA CCAACGGCAG CAGCATTAGC CTATGGTATT 
GATAAGAAAC AAGGCGACAA CATTGTTGCG GTATACGATT TAGGTGGTGG TACATTCGAT 
ATCTCTATCA TCGAAATCGA CAGCAACGAT GGCGACCAAA CATTTGAAGT GTTGGCAACC 
AACGGTGACA CCCACTTAGG TGGTGAAGAC TTTGACAACC GTTTGATCAA CTACTTAGCT 
GACGAATTCA AGAAAGAGCA AGGCTTAGAT CTGCGTAAAG ATCCATTAGC AATGCAACGT 
CTGAAAGAAG CAGCAGAAAA AGCGAAAATT GAACTTTCAA GCACCAACCA CACTGAAGTG 
AACCTGCCAT ACATCACGGC AGACGCAACA GGTCCTAAGC ATTTAGTGAT TAAAATCACC 
CGTGCTAAAT TGGAATCACT GGTTGAAGAC TTGATTCTCC GTACATTAGA GCCACTGAAA 
GTTGCCCTGG CTGATGCAGA TTTATCTGTA ACAGACATCA ACGAAGTGAT TCTAGTGGGT 
GGTCAAACAC GTATGCCTAA GGTTCAAGAA GCAGTGACAA ACTTCTTCGG CAAAGAACCT 
CGTAAAGACG TGAACCCAGA CGAAGCGGTA GCCGTAGGTG CTGCAATTCA AGCGGGCGTT 
CTGTCAGGCG ACGTGAAAGA CGTATTACTG TTAGACGTAA CACCACTGTC TCTTGGTATC 
GAAACCATGG GCAGCGTGAT GACTAAGTTG ATTGAGAAGA ACACCACTAT TCCTACTAAG 
GCGCAGCAAG TGTTCTCAAC AGCCGATGAC AACCAAAGTG CAGTGACCAT TCACGTACTG 
CAAGGTGAGC GTAAGCAAGC GAGCGCGAAC AAGTCATTAG GTCAGTTCAA CTTAGACGGT 
ATTGAGCCAG CACAACGTGG CCAGCCACAA ATTGAAGTGA TGTTCGACAT CGATGCCGAC 
GGTATTCTGC ATGTGTCTGC TACAGACAAG AAAACCGGCA AGAAACAAAA CATCACCATC 
AAAGCATCTT CTGGCTTAAG CGAAGAAGAA GTGGCGCAAA TGGTACGTGA TGCCGAAGCT 
CACGCAGATG AAGACAAGAA GTTTGAAGAG TTAGTGCAAT CACGCAACCA AGCTGACGGC 
TTAGTTCACG CAACTAAGAA ACAAGTTGAA GAAGCGGGCG ATGCACTGCC AAGCGAAGAT 
AAAGAGAAAA TCCAAGCTGC GATGGATGCT GTTGACACTG CTATCAAAGG CAATGACAAA 
GAAGCCATTG AAAAGGCAAC TCAAGAACTG ATCGAAGCAT CTGCTAAGCT GATGGAAATC 
GCTCAAGCTA AGTCTCAAGC TCAAGGCGGC GACAATGCCG ACGCGGGCAA ACAGGCTAAC 
GCTACTGCCG ATGACGTTGT CGATGCTGAA TTCGAAGAAG TGAAAGACGA CAAGAAATAA 

 

Protein sequence

MGKIIGIDLG TTNSCVAVLD GGKARVLENA EGDRTTPSII AYTDDETIVG SPAKRQAVTN 
PTNTFFAIKR LIGRRFKDDE VQRDVNIMPF KIIAADNGDA WVESRGNKMA PPQVSAEILK 
KMKKTAEDFL GEEVTEAVIT VPAYFNDSQR QATKDAGRIA GLDVKRIINE PTAAALAYGI 
DKKQGDNIVA VYDLGGGTFD ISIIEIDSND GDQTFEVLAT NGDTHLGGED FDNRLINYLA 
DEFKKEQGLD LRKDPLAMQR LKEAAEKAKI ELSSTNHTEV NLPYITADAT GPKHLVIKIT 
RAKLESLVED LILRTLEPLK VALADADLSV TDINEVILVG GQTRMPKVQE AVTNFFGKEP 
RKDVNPDEAV AVGAAIQAGV LSGDVKDVLL LDVTPLSLGI ETMGSVMTKL IEKNTTIPTK 
AQQVFSTADD NQSAVTIHVL QGERKQASAN KSLGQFNLDG IEPAQRGQPQ IEVMFDIDAD 
GILHVSATDK KTGKKQNITI KASSGLSEEE VAQMVRDAEA HADEDKKFEE LVQSRNQADG 
LVHATKKQVE EAGDALPSED KEKIQAAMDA VDTAIKGNDK EAIEKATQEL IEASAKLMEI 
AQAKSQAQGG DNADAGKQAN ATADDVVDAE FEEVKDDKK