| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3406 |
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| Symbol | |
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| ID | 5370462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4044425 |
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| End bp | 4045756 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640831666 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001367596 |
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| Protein GI | 153001915 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0661425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTTC CCGAGCTTTC TTCTTCCCCT GAGTCGTTAA CTTTTGCTGA GCTTGGCATA
AATTCGGCGT TACTTAAGGC TTTGCCTGCA ACGCTGGTGC ATCCGACAAA GGTGCAGCAA
CTCGCGATTC CGGCCATTCT AGCGGGAAGG GATTTGTTAG CCTTAGCACA AACCGGTAGC
GGGAAAACCT TAGCTTTTGG TTTGCCACTT CTACAACAAC TTTTGTTGCA ACAGCAAACA
CAGTTACAGG GTACTAAGTC TGTGCCGCCC TCAAATGCGC TGGCGTTAGT GCTGGTTCCT
ACACGGGAAT TAGCGCTGCA AGTGACTGAA GCGTTGCAAG CGGTGGCAAG TCAGTTATCG
GCTTCGTTGA ACATTCAGCT TCTGTGTGGC GGCGTCCCCT TGGAAGATCA ATTAGTAGAA
CTTGCAGCCA AGCCGCAGGT ATTAGTGGCA ACCCCTGGGC GTTTACTGGA TTTATGCAAA
CAGTCCCACA TCAGCCTCGA TTCGATAAAA CATCTTGTGC TGGATGAAGC TGACCGCCTG
CTGGAAATGG GGTTCTGGCC CGATGTGCAA AAGCTGATGG CGTTCATGCC TAAACTTAAG
CAAACCTTGT TGTTTTCTGC CACCTTGCCC GAGGCTTTGG ATACATTAAC CGAAAAGCTG
CTGGTGAATG AGCCGCTGCG GGTCGAAGCC CACAAGGTGA ATTCCGTTGC TGGTGAAATC
GAAGAACAAC TCTATTTAGT CAATAAGGGC AGTAAAGCGC AGGTATTGAT TGCGCTGTTA
AAACAATATC AATGGCCGCA GGTGCTGGTG TTTATCAGCG CCCGTGATGA TGCCGATGCC
GTCGCTAAAC GGCTCGCCAA AGCGGGGATG AAAGTCGCCG CGCTGCACGG TGAAAAAGAT
CAAGCCGTAC GCAGCCAAAC CTTGGCCGAC TTTAAAGCCA ATCGGATCCA AGTATTAGTG
GCGACAGATT TGATGGCGCG CGGCATTCAT GTTGATGCTT TGCCAGTCGT TATCAATTTG
GATTTGCCCA TGAGTGCGCC TGTGTACGTG CACCGTATTG GCCGCACCGC GCGCGCTGGC
GAAAAAGGGC TGGCGATTTC CCTCGTGTGC CACGGTGAAA TGGCGACCTT AACGGCGATC
CGCAGTTTGA CCGCGCGGGA GTTACCGCTG GCATTATTGG CTGACTTTCC GGTAACGGAT
AAGCCGAGTG AAAATACCAG TGATGGCACC GCAGAGAGCA AGGTTGAGCG TAAGCGACCA
CCGCGGGATA AACAGGCGAA TCGCCGTAGC ATCAATAAGC ATAGCGCCAA AGAGTTTAAA
GGTAAGCGCT GA
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| Protein sequence | MTFPELSSSP ESLTFAELGI NSALLKALPA TLVHPTKVQQ LAIPAILAGR DLLALAQTGS
GKTLAFGLPL LQQLLLQQQT QLQGTKSVPP SNALALVLVP TRELALQVTE ALQAVASQLS
ASLNIQLLCG GVPLEDQLVE LAAKPQVLVA TPGRLLDLCK QSHISLDSIK HLVLDEADRL
LEMGFWPDVQ KLMAFMPKLK QTLLFSATLP EALDTLTEKL LVNEPLRVEA HKVNSVAGEI
EEQLYLVNKG SKAQVLIALL KQYQWPQVLV FISARDDADA VAKRLAKAGM KVAALHGEKD
QAVRSQTLAD FKANRIQVLV ATDLMARGIH VDALPVVINL DLPMSAPVYV HRIGRTARAG
EKGLAISLVC HGEMATLTAI RSLTARELPL ALLADFPVTD KPSENTSDGT AESKVERKRP
PRDKQANRRS INKHSAKEFK GKR
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