| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3399 |
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| Symbol | |
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| ID | 5373691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4034987 |
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| End bp | 4035724 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640831659 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001367589 |
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| Protein GI | 153001908 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCTC CTGCCGCCGA TAGCCTTGCC AAAGTCGATA CTTTTATTGC GCCGCCTTGC
CTCGGGCAAA TACGCGTGCT TTATCAAGAT AGCGACATTC TGCTGATTGA TAAGCCGAGC
GGATTATTGA GTCTGTCGGG GAAGAATCCG CTCAATCTCG ATTCGGTGCA TTATCGCTTA
GTGCAGGATT TTCCGACGGC CACTTTGCTG CACAGACTCG ATTTTGGCAC TTCGGGCATC
ATGCTGGTGG CGCTGAATAA AAGCGTGAAT GGCTTGCTGA CCAAGCAGTT TCAGGCGCGC
ACGGTCGAGA AGCGTTATAC CGCCTTGCTG CACGGACATA TCGCCGCTGA CAGCGGGGTG
ATTAATCTGC CGATCGCTAA AGATTGTGAC CATTTCCCAC TACAAAAGAT TTGCCACAGC
ACAGGTAAAC CTGCGATCAG CGAATATCGT GTGCTGGAAC GGTTAACCGA GCCTTTTGCC
ACGCGGGTCG AGTTTACTCC GGTTTCTGGC CGAACCCATC AACTGCGGAT CCACAGTCAG
CAATTTGGTC ACTCGATTCT GGGGTGCGAT CTCTATGGTG GCGTGGGTGA GAGTGTGGCT
GATAACGCTG CTGCACCTGA TCCAGACATC ACTAAGATGA CGAATAACAG CAGATTAATG
CTGCATGCGA CCCGCTTAGC GTTTGATCAT CCTATCACGG GTGAGCGTAT CGACTGGATT
TGCGAGTGTC CTTTCTAA
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| Protein sequence | MSAPAADSLA KVDTFIAPPC LGQIRVLYQD SDILLIDKPS GLLSLSGKNP LNLDSVHYRL
VQDFPTATLL HRLDFGTSGI MLVALNKSVN GLLTKQFQAR TVEKRYTALL HGHIAADSGV
INLPIAKDCD HFPLQKICHS TGKPAISEYR VLERLTEPFA TRVEFTPVSG RTHQLRIHSQ
QFGHSILGCD LYGGVGESVA DNAAAPDPDI TKMTNNSRLM LHATRLAFDH PITGERIDWI
CECPF
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