Gene Shew185_3352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3352 
Symbol 
ID5370003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp3996062 
End bp3996574 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content43% 
IMG OID640831611 
ProductNUDIX hydrolase 
Protein accessionYP_001367542 
Protein GI153001861 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTCA GAAAATCTTC GAGATTATTT ATCGTAGATA GCGAAGGACG CCTTTTATTA 
TTTTTATACA AGGACGAGCA TCAAGCACCA TTCTGGGCAA CCGCTGGCGG CGAGCTTAAA 
ACAGGAGAAA GCTACACTGA CGCCGCCGCA CGGGAGCTAT ACGAGGAAAC TGGACTTACT 
CTAAAAATTG GACATCTTCT GAAAGAGCGA GATGAAGTAT ATGCTGTAGC ACGCTCAACA 
CCTGCGCGCT GGCTAGAAAA ATACTATCTA GTAGAGTGCC CAATAAATTC AAATATATTC 
GCGGCAGAAT GGACCGACGA AGAAAAGTGC ACCATTCAAA AATGGAAATG GTGGAGTATT 
AAAGAAATGC AAAATGAGAA CCCAAACATA TTCAAACCAA AGTGGATTCC TGAGCTTTTG 
AGTGCAGTAT TGAGCCAACG CCAACATTCG CCTAACAAGC GTTCTGACTA TTTAGCCTTA 
AATCGTGCCG TGAATCACTC TGACCTAGAC TGA
 
Protein sequence
MEVRKSSRLF IVDSEGRLLL FLYKDEHQAP FWATAGGELK TGESYTDAAA RELYEETGLT 
LKIGHLLKER DEVYAVARST PARWLEKYYL VECPINSNIF AAEWTDEEKC TIQKWKWWSI 
KEMQNENPNI FKPKWIPELL SAVLSQRQHS PNKRSDYLAL NRAVNHSDLD