| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3348 |
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| Symbol | |
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| ID | 5370098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3991848 |
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| End bp | 3992741 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640831607 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001367538 |
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| Protein GI | 153001857 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGAA TAGACAACGC TTGGCTATAC TCGTTTATTT CTGTGTACGA ACAGAGCAGT
TTTACCAAGG CATCTGAGCG TTTACTCATT CCAAGTTCAA CAGTCAGTAG GCATGTGCAA
TTACTTGAAA CTGAAATTGG CAATAAGCTG TTTTATCGAA CAACACGGAA AGTCACTCCA
ACGCCGAATG GTGAAATGCT TTACCGTGAG ATCCAAGCTC CTCTTCGCCA GTTAAATCAT
GCATTGCAGA GTATTAGCGC ATCGACTCAA TTGACAAACG GTAGTATTCG ATTAAGCACA
CCTGACATCC CATTTATCGG CGATATCCTT GCCGACTTTG CTTACCACTA TCCTAATATT
TCTCTTTTTT GTGAACACAG CACCTCGATG GAGAGTGCAC TCAATAATGA CCCTGACATT
ATCATTAGCT TTGAACGAGG TAGACTAGAT GAAAGTGATT GGGTGTCTAA GCCTCTATGT
GAATGGGAAA GTGTGATTGT TGCTTCCACT GCTTGTCTTG AAAGATATGG AACGCCGAAG
ACCATTGAGG ATCTACGAAT TATTCCATGC ATATCGAGCT ACAAGGCCTT TGGTGGCAAT
CCTTGGATAT TCCAAACGTC AGATAAACGC AGTACGCAAT CATTAGAAGT AGAATCGAAA
GTAAATGTTG ATGGTGGTTT CATTGCTAAA GCTTCAGCGA TGCGCGGATT AGGTTTCGTT
GCGTTACCTA AAGTTTTTTG TACTGAGGAG TTGAATCGAG GTCTGTTGAT TGAACAGCAT
TTAGATTGTC AATTAGCACC GTTAACCATA TATATCCATC ATCGTTCCAT CACCTTTCAT
ACTCATCTAA TAATGTTACT GGTGAATTTT ATGCGTCAGC AGGTAAATGC ATAA
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| Protein sequence | MDRIDNAWLY SFISVYEQSS FTKASERLLI PSSTVSRHVQ LLETEIGNKL FYRTTRKVTP
TPNGEMLYRE IQAPLRQLNH ALQSISASTQ LTNGSIRLST PDIPFIGDIL ADFAYHYPNI
SLFCEHSTSM ESALNNDPDI IISFERGRLD ESDWVSKPLC EWESVIVAST ACLERYGTPK
TIEDLRIIPC ISSYKAFGGN PWIFQTSDKR STQSLEVESK VNVDGGFIAK ASAMRGLGFV
ALPKVFCTEE LNRGLLIEQH LDCQLAPLTI YIHHRSITFH THLIMLLVNF MRQQVNA
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