| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3235 |
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| Symbol | prfC |
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| ID | 5371142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3859113 |
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| End bp | 3860684 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640831485 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001367425 |
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| Protein GI | 153001744 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.458258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATAG AAATCAATAA GCGACGCACT TTTGCTATTA TATCGCACCC CGACGCGGGT
AAAACAACCA TTACCGAAAA AGTGCTGTTA TTCGGAAACG CTTTGCAAAA AGCGGGAACG
GTTAAAGGCA AAAAATCGGG TCAGCATGCT AAGTCTGACT GGATGGAAAT GGAGAAGGAC
CGTGGTATTT CTATTACTAC GTCTGTGATG CAATTCCCCT ATGGTGGCGC CCTCGTTAAC
CTACTCGACA CGCCTGGTCA CGAAGACTTC TCTGAAGATA CCTATCGTAC ACTGACCGCT
GTTGACTCTT GTCTGATGGT CATCGACTCT GCTAAAGGTG TTGAAGAGCG TACTATTAAG
TTGATGGAAG TGACACGTCT GCGCGATACG CCGATCGTGA CTTTCATGAA CAAACTCGAC
CGTGATATCC GTGATCCTAT CGATCTGATG GATGAAGTCG AAAGCGTGCT GAATATTGCC
TGCGCACCTA TTACTTGGCC TATTGGCAGC GGTAAAGAAT TCAAAGGTAT TTACCATATA
CTGCGTGATG AAGTGGTCTT GTATCAAGGC GGTATGGGAC ACACAATTCA AGAGCGTCGT
GTAATTAAAG GCATTAATAA TCCTGATCTT GAGAAAGCGA TTGGCAGTTA CGCTGCTGAT
TTGCGCGATG AGATGGAATT AGTGCGCGGC GCGTCGCATG AATTTGACCA TGCAGCTTTC
TTAAAAGGTG AGTTGACGCC AGTGTTCTTC GGTACTGCGT TAGGTAACTT TGGTGTGGAC
CATATTCTTG ACGGCATCGT CGAGTGGGCG CCTAAGCCAT TACCGCGCGA AAGTGATACA
CGCGTTATCA TGCCTGATGA AGAAAAATTC ACCGGTTTCG TGTTCAAGAT CCAAGCAAAC
ATGGATCCAA AACACCGTGA CCGTGTCGCC TTTATGCGTG TGTGTTCTGG CCGTTACGAG
CAAGGCATGA AAATGCACCA TGTGCGTATT GGTAAAGATG TTAACGTTAG CGATGCATTA
ACCTTTATGG CGGGCGATCG TGAGCGCGCT GAAGAAGCTT ACCCAGGCGA TATCATCGGT
TTACATAACC ATGGCACTAT CCGTATTGGC GATACTTTTA CCCAAGGTGA AAAATTCCGT
TTCACTGGCG TGCCTAACTT CGCCCCTGAA ATGTTCCGCC GTATTCGTCT GCGCGATCCG
CTTAAGCAAA AACAGCTCTT AAAAGGCTTA GTACAGTTGT CAGAAGAAGG CGCTGTGCAA
GTATTCCGCC CAATCGATAC TAACGATTTA ATTGTTGGCG CCGTGGGTGT GCTGCAGTTT
GAAGTGGTTG TTGGTCGTCT TAAGAGCGAA TATAACGTTG AAGCCATTTA CGAAGGTATT
AGTGTTTCGA CCGCTCGCTG GGTTTATTGT AAGGATGAGC GTAAGCTTGA AGAGTTCCGC
CGCAAGTGTA GCCAAAACTT AGCACTCGAT GGTGGTGACA ACTTAACCTA TATTGCGCCA
ACTATGGTCA ACCTTAATCT TTCGATGGAA AGGTATCCTG ATATTGAGTT TGCAAAAACC
CGCGAGCACT AA
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| Protein sequence | MSIEINKRRT FAIISHPDAG KTTITEKVLL FGNALQKAGT VKGKKSGQHA KSDWMEMEKD
RGISITTSVM QFPYGGALVN LLDTPGHEDF SEDTYRTLTA VDSCLMVIDS AKGVEERTIK
LMEVTRLRDT PIVTFMNKLD RDIRDPIDLM DEVESVLNIA CAPITWPIGS GKEFKGIYHI
LRDEVVLYQG GMGHTIQERR VIKGINNPDL EKAIGSYAAD LRDEMELVRG ASHEFDHAAF
LKGELTPVFF GTALGNFGVD HILDGIVEWA PKPLPRESDT RVIMPDEEKF TGFVFKIQAN
MDPKHRDRVA FMRVCSGRYE QGMKMHHVRI GKDVNVSDAL TFMAGDRERA EEAYPGDIIG
LHNHGTIRIG DTFTQGEKFR FTGVPNFAPE MFRRIRLRDP LKQKQLLKGL VQLSEEGAVQ
VFRPIDTNDL IVGAVGVLQF EVVVGRLKSE YNVEAIYEGI SVSTARWVYC KDERKLEEFR
RKCSQNLALD GGDNLTYIAP TMVNLNLSME RYPDIEFAKT REH
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