| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3181 |
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| Symbol | |
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| ID | 5370771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3796462 |
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| End bp | 3797700 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640831434 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001367374 |
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| Protein GI | 153001693 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGCA ATAAACCCTT ACGAATAATG ATGTTAACGG CTGTGGCCGC TTTCGTTCTT
TCTGCTTGTG GTGAGCAAAC AGCGCAGCAG GGGCCAGCAC CAAGTGCGCC TATGGTGGAT
GTCGCCCAAG TATTGCATGA GCGAGTGACC GAATGGGACG AGTTTACCGG CCGTTTACAG
GCGCCAGAAA GTGTCACCCT TATCCCGCGT GTATCTGGAT ATATCGACTC AGTGAATTTT
AAAGAAGGCG CCTTAGTGAA AAAAGGCGAC GTATTATTCC GCATCGATCC AAGTGTTTTT
GAAGTGGAAG TGGCCCGGTT AAAAGCAGAT CTTGCTAGCG CACTCTCTGC TGAGCAACTG
GCCACAAATG ACTTTGAACG AGCCCATAAA TTGTTTGACC AAAAAGCGGT GTCTGCCGAG
TTACTCGATA CCCGTGAGTC AAACAAACGT CAAACCGCGG CTGCAGTGGC CTCGGTGAAA
GCGGCGCTAA TGCGCGCCGA GCTTGATTTA GCTTATACCC AAGTACAAGC GCCAATTGAT
GGTCGCGTGT CCTACGCGAA TGTCACTGCG GGCAATTATG TTACTGCGGG GCAGAGTGTG
CTGACCAGCT TAGTCTCTAC CGCCAGCATG TATGCCTATT TCGATGTGGA TGAGCAAACC
TACCTTAAAT ACGTGAAATT AACGGCCGAG AAGAAACGCA ACGATCCCCG CGCAGGCGAC
AATCCTGTGT ACATGGCCTT AGCCAATGAG CGTGATTATC AGCATATCGG CATGGTGGAC
TTTGTGGATA ATGCGATGGA TAAGCAAACC GGCACCATTC GCGTGAGAGC CACCTTTGAC
AATGAAGACA ATAGCTTATT GCCTGGCTTA TTTGCCCGCC TTCGCACCGC AGGCAGCGGC
GCTTATGAAG GTATCTTGAT TGACGATAAA GCCGTTGGTA CAGATCTGAA CAATAAGTTT
GTGTTAGTGG TGGGCGCCGA TGGTTTAGTT GAATATCGCG GCGTGACCTT AGGCGAAAAA
GTCCAAGGAC TGCGCATCGT GACCCAAGGT TTGATGGCCG AAGATAAGAT CGTCGTCAAC
GGTATGCAGC GCGTGCGCCC TAAGATGCAA ATTGATCCGC ATATGGTTGA AATGGTCGAC
AGCGACAAGC TCGAAGCATT ACGCCAAGCC CAGTTAATCC TAGATAAAAA CCAAGATACT
TTGACGGCGC AAGCGGTCGA AACGGCTAGC CGCGGTTAA
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| Protein sequence | MKSNKPLRIM MLTAVAAFVL SACGEQTAQQ GPAPSAPMVD VAQVLHERVT EWDEFTGRLQ
APESVTLIPR VSGYIDSVNF KEGALVKKGD VLFRIDPSVF EVEVARLKAD LASALSAEQL
ATNDFERAHK LFDQKAVSAE LLDTRESNKR QTAAAVASVK AALMRAELDL AYTQVQAPID
GRVSYANVTA GNYVTAGQSV LTSLVSTASM YAYFDVDEQT YLKYVKLTAE KKRNDPRAGD
NPVYMALANE RDYQHIGMVD FVDNAMDKQT GTIRVRATFD NEDNSLLPGL FARLRTAGSG
AYEGILIDDK AVGTDLNNKF VLVVGADGLV EYRGVTLGEK VQGLRIVTQG LMAEDKIVVN
GMQRVRPKMQ IDPHMVEMVD SDKLEALRQA QLILDKNQDT LTAQAVETAS RG
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