| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3169 |
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| Symbol | |
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| ID | 5371638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3779016 |
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| End bp | 3780125 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640831422 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001367362 |
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| Protein GI | 153001681 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000222351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CCATTATTGC CATTGCCCTG CTTGCGGTTA TCGCCACAGC GGTGAGTTTT
AGTGATGTCC TTCAAGCAGC CAAACCCGAA AGCGCTCCCC ACCTTATGCG TACCGTTCCA
GTGGTCACGG GTGCAGTCGT TGAATATCCG TTAGCACAAT CTATCTCGCT TATCGGCAAA
CTCGCTGCCG AACGCGCAGT GATCATCGCG CCGCAAGTCA CAGGTAAGAT TAAGCAAGTC
GCCGTGACCT CAAACCAAGC GGTGAAAAAA GGCCAGTTAC TCATCGAACT CGATGATATG
AAAACCCAAG CCGCCGTCGC CGAGGCCAAT GCGTTTCTCA ACGATGAAAA ACGTAAACTC
AAAGAATTTG AAAAACTGAT CAGCCGTAAC GCCATCACCC AAACCGAGAT TGACGCACAA
AAAGCCAGTG TCGATATCGC CCAAGCACGC TTAGCTTCAG CCCAAGCGGA TTTACATTAC
CACTCGCTGA TTGCGCCGTT TGCGGGCAAT ACAGGTCTGA TTAATTTCAG CGAAGGCAAG
ATGGTCAGCA TAGGCACTGA ATTAATGTCG CTGGATGATT TATCTAGCAT GCGCCTCGAC
CTACAAGTGC CAGAGCATTT CCTGTCGCAG TTGAGCATAG GTATGCAAGT GGCGGCCACC
AGCCGCGCTT GGCCGGATGA AACCTTTACC GGCAAAGTTG TCGCTATCGA TCCCCGCGTC
AATGAAGAAA CCTTAAACCT TAAAGTGCGG GTGCAATTCG ACAACCCCAA AAATCGCTTA
AAACCGGGCA TGATGATGTC ATCCACTATC ACGTTCCCTG CGATTTCAGC ACCTATGGTG
CCAGTACAAG CCCTTGAATA TTCAGGCACT AAACGTTACG TGTACGTGGT TAGCGCCGAT
CACATCGCCA ACCGCACCGA AGTGCAGTTA GGTGCGCGTA TCGATAACCA AGTCTTGATT
GAAAACGGTT TAAAAATAGG TGACAAAGTC GTGGTGCAAG GCTTAGTGAA TATGCGCGAT
GGCCTGAAAA TCAATGAAGT GACGCTTGAT GCCAAGGCAT CTACCCGTGC GGCTGAGCTT
TCAAGCCCAA AAGCTACGGA GACTAAATAA
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| Protein sequence | MKKTIIAIAL LAVIATAVSF SDVLQAAKPE SAPHLMRTVP VVTGAVVEYP LAQSISLIGK
LAAERAVIIA PQVTGKIKQV AVTSNQAVKK GQLLIELDDM KTQAAVAEAN AFLNDEKRKL
KEFEKLISRN AITQTEIDAQ KASVDIAQAR LASAQADLHY HSLIAPFAGN TGLINFSEGK
MVSIGTELMS LDDLSSMRLD LQVPEHFLSQ LSIGMQVAAT SRAWPDETFT GKVVAIDPRV
NEETLNLKVR VQFDNPKNRL KPGMMMSSTI TFPAISAPMV PVQALEYSGT KRYVYVVSAD
HIANRTEVQL GARIDNQVLI ENGLKIGDKV VVQGLVNMRD GLKINEVTLD AKASTRAAEL
SSPKATETK
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