Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3117 |
Symbol | |
ID | 5372285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3713243 |
End bp | 3714301 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640831363 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_001367311 |
Protein GI | 153001630 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000809981 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGATAT TAGACCTTTA TATCGCCAGA GTATTGTTAA GCACTTCAGC GCTGTGTTTG CTGGTGTTGA CAGGCTTGTC GGGCATCATC AAATGGGTTG ACCAGTTGCG TTTAGTCGGT CGTGGCACCT ATAGCATGAT GGATGCGGGC ATCTATGTGT TGTTTTTAGT GCCACGGGAT ATCGAAATGT TTTTCCCTAT GGCCGTGTTG CTGGGCGCAT TGATTGGCAT GGGAATGCTG GCATCGAACT CTGAACTTGT GGTGATGCAA GCTTCTGGCA TGTCACGTTT GCAGATCACT ATGTCGGCGA TGAAAACCGC TGTTCCCTTG ATGTTGCTGG TGATGGTGTT AGGGGAATGG GGCGCACCGA TTGCTGAGCA AAAGGCTAAT GAGTTGCAAG CCATTAAACT CTCAGGCGGG AGTTTAATTA AGTCCCATCG CGGTATTTGG GCAAAGGACG GTGATTTGTT CGTGAACATT GGTGAAGTTG AAAACATCAA TAAACTCAAC AACATTACGC TTTATAAGTT CAATAGCGAA CTCAAGCTCA CCAACGTTGT TCATGCGGAC CGCGCGGTGT TTTCCCAAGA CCGTTGGCGT TTATTCGACG TCAAACGTAC CGATTTAAGC TATGAGAAAG TCGTGCTTGA GTATCTGGAA GAAGACCAAT GGCAGTCGAG TTTAACGCCG GATAAGCTCA GTGTAGTTTC GATTAAACCT GAAGCGTTAT CTATCCGCGG TCTGGTCGGT TATCTCGATT ACCTTAAAAC CAACAGCCAA GATCCTAGCC GCTATGAATT GGCATTGTGG CGCAAGGTGA TGCAGCCGGT GACGGTCGCT GTGATGATGT TAGTGGCACT GTCGTTTGTA TTTGGGCCGC TGCGAACTGT GACTATGGGC GCGCGGGTAT TGCTCGGGGT TGTGGCGGGT TTCAGCTTTT ATATCAGTAA TGAGATTTTT GGTCCTATGA GCATAGTGTA TGAGTTACCT GCCTATGTGG GGGCTGTGGC ACCAAGCTTG CTGTTTACCG GCGTTGCCTT CTACTTTATC CGGCGATGA
|
Protein sequence | MKILDLYIAR VLLSTSALCL LVLTGLSGII KWVDQLRLVG RGTYSMMDAG IYVLFLVPRD IEMFFPMAVL LGALIGMGML ASNSELVVMQ ASGMSRLQIT MSAMKTAVPL MLLVMVLGEW GAPIAEQKAN ELQAIKLSGG SLIKSHRGIW AKDGDLFVNI GEVENINKLN NITLYKFNSE LKLTNVVHAD RAVFSQDRWR LFDVKRTDLS YEKVVLEYLE EDQWQSSLTP DKLSVVSIKP EALSIRGLVG YLDYLKTNSQ DPSRYELALW RKVMQPVTVA VMMLVALSFV FGPLRTVTMG ARVLLGVVAG FSFYISNEIF GPMSIVYELP AYVGAVAPSL LFTGVAFYFI RR
|
| |