Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3078 |
Symbol | |
ID | 5373745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3668881 |
End bp | 3670152 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640831324 |
Product | HAAAP family transport protein |
Protein accession | YP_001367272 |
Protein GI | 153001591 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.283138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCAA CAATTACTGC TGCACAGTGG AAAGCAGATA CCCGCTTCGA TAGTACGGAT TGGGGCTGGA TAATCATGAG TATCGGAATG GCAATTGGCG CGGGGATCGT GTTCTTGCCT GTTCAGGTCG GTTTAATGGG TCTATGGGTG TTCTTACTGT CAGGCATTAT TGGCTATCCG GCCATGTATA TGTTCCAGCG GTTATTTATC AATACCTTAG CCGAATCGCC TGAGTGTAAG GATTACCCGA GTGTGATTTC GGGTTACTTA GGTAAAAACT GGGGCATGTT GTTGGGCGGT TTGTACTTCA TCATGCTGGT TATTTGGGTG TTTGTGTATT CAACGGCCAT TACTAACGAC AGTGCTTCTT TTTTACAGAG CTTTGGGGTG ACGAAAGAGT TGTTGTCACA TAATCCCTTC TACGGGTTAG CGCTGATCTG CGGCTTAGTT GCTTTAGCAT CCCGCGGCGA AAATCTACTG TTTAAGATCT CCACTTTTAT GGTGCTGACT AAGCTGGGCG TTGTGGCTGT GTTAGGGCTA TTGATGGTGG ATAAGTGGGA TATCAATAAT ATTGGCGCTA TCCCAGCAAC GGGAGATTGG TTAAAAGATG CGGTCGTTAT GCTGCCCTTT ACGCTGACAT CGATTCTGTT TATTCAAAGT TTAAGCCCTA TGGTGATTTC ATACCGTTCG CGGGAAAAAT CCTTAGCCGT GGCGCGCTTT AAAGCGATGC GTGCCATGAA TATTGCCTTT GGTGTCTTGT TTGTCGTGGT GTTCTTTTAT GCTGTGTCAT TCACGCTCGC TATGGGTCAT GAACAAGCGG TGCGTGCATC GGAAGAAAAT ATCTCAGCCT TAGCCATGGT CGCCCAAGGT ATGCAGGGAC AAACACTGAA ATTACTGAGC CTGACACTGA ACATTTTTGC GGTAATGACT GCTTACTTTG GGGTGTATCT TGGTTTCAGG GAAGCTTGCC AAGGGCTAAC CATGAATATG CTGCGTCGAT ATATGCCTGA AGATCGCATC AACAAAAAGC TTGTGGGTTA CGGCATCATG ATTTTCACGA TTCTACTGTC GTGGGGTGCG ATTGTATTGA ATGCGCCAGT GCTGAGCTTT ACGTCGATTT GCAGTCCAAT CTTTGGTTTG GTCGGGTGTT TGATCCCTGC TTATTTAGTG TATCAAGTGC CTGCACTGCA TAAGTACAAA GGCGCGTCGC TGTACATCAT TATCATCACA GGTTTATTGC TGTGTGTATC ACCTTTCTTG GCGTTTAGTT AG
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Protein sequence | MDATITAAQW KADTRFDSTD WGWIIMSIGM AIGAGIVFLP VQVGLMGLWV FLLSGIIGYP AMYMFQRLFI NTLAESPECK DYPSVISGYL GKNWGMLLGG LYFIMLVIWV FVYSTAITND SASFLQSFGV TKELLSHNPF YGLALICGLV ALASRGENLL FKISTFMVLT KLGVVAVLGL LMVDKWDINN IGAIPATGDW LKDAVVMLPF TLTSILFIQS LSPMVISYRS REKSLAVARF KAMRAMNIAF GVLFVVVFFY AVSFTLAMGH EQAVRASEEN ISALAMVAQG MQGQTLKLLS LTLNIFAVMT AYFGVYLGFR EACQGLTMNM LRRYMPEDRI NKKLVGYGIM IFTILLSWGA IVLNAPVLSF TSICSPIFGL VGCLIPAYLV YQVPALHKYK GASLYIIIIT GLLLCVSPFL AFS
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