Gene Shew185_3034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3034 
Symbol 
ID5369571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp3628867 
End bp3629469 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content47% 
IMG OID640831276 
Producthypothetical protein 
Protein accessionYP_001367228 
Protein GI153001547 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00000468613 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGATC AACTTAGCCA CATCGAACGG AGTAGTTTAA TGGAGAGTTT GCAGAACCAT 
TTCTTAATTG CCATGCCTTC ACTGCACGAT ACGTTTTTTG AACGCTCAGT CATCTATATC 
TGTGAACATG ATGCCAAAGG CGCCATGGGA CTGGTGATCA ATAAACCGCT CGGTATCGAA 
GTTAATTCGC TATTAGAACA AATGGATTTG CCAGCTGAGC AAGTCTCCAC CGATTTAGCG 
TTCAATGCCA ATGTCATGAT GGGCGGACCC GTTTCCCAAG ATCGTGGCTT TGTACTGCAT 
ACCTCTCAGC CCTATTGGGC CAACAGCACA GATCTGGGTT GTGGTTTAAT GCTAACCACC 
TCACGCGATG TGTTAACCGC TATTGGAAGC AACAGATCGC CAGAGAAGTT CCTCGTCGCA 
TTAGGATATG CTGGATGGAG CAAAGATCAG CTCGAACAAG AGCTTGCCGA TAATTCTTGG 
CTAACGATTC CAGCAACCAA TGCACTCTTG TTTGACATTA AACACGAAGA CCGTTGGCCA 
CAGGCCAGCC GAGCTCTTGG ATTTGATGCT TGGCAGGTTT CAGCTCAAGC GGGTCACGCT 
TAA
 
Protein sequence
MLDQLSHIER SSLMESLQNH FLIAMPSLHD TFFERSVIYI CEHDAKGAMG LVINKPLGIE 
VNSLLEQMDL PAEQVSTDLA FNANVMMGGP VSQDRGFVLH TSQPYWANST DLGCGLMLTT 
SRDVLTAIGS NRSPEKFLVA LGYAGWSKDQ LEQELADNSW LTIPATNALL FDIKHEDRWP 
QASRALGFDA WQVSAQAGHA