Gene Shew185_2950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2950 
Symbol 
ID5372192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3533937 
End bp3534752 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content43% 
IMG OID640831191 
Productflagellin domain-containing protein 
Protein accessionYP_001367144 
Protein GI153001463 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATAA CAGTTAATAC CAACGTGACT TCGATGAAGG CGCAAAAGAA CTTAAACGCT 
TCAGGCAATG CATTGGCAAC GTCTATGGAA CGTCTTTCCA GTGGTTTGCG TATTAACAGC
GCAAAAGATG ATGCAGCAGG GTTAGCAATT TCTAACCGTT TGAACTCTCA GGTTCGTGGC
TTAGATGTTG GCATGCGTAA TGCCAACGAC GGTATTTCAG TGGCGCAAAT CGCAGAAGGT
GCGATGCAAG AGCAAACAAA CATGCTGCAA CGTATGCGTG ATTTGAGTGT TCAGGCGGTT
AACGGTGCAA ACTCTACCAG TGATAAAGAT GCCATTCAAG CCGAGATAGA TCAGTTGGCT
CTTGAAATTA CAGCTATTTC TAACACTACA GCTTTTGGCG ATACTAAACT ACTTAGTGGC
GGTTTTTCTG CTAAGAGCTT TCAAGTAGGT CATCAAGAAG GCGAAAATAT TTCTATTTCA
ATTTCAGGAA CAGATGCTGG AACATTAAGT GTCGATGCCT TACTGGTTTC TTCAGATAGC
GCTGCATCAA CATCAATAGG ATTAATTGAT GCGGCTATTA AGACTATTGA TACTCAACGC
GCGAAGCTTG GGGCAACTCA AAATCGCCTT GCTCATAATA TCAGTAACAG TGCTAATACG
CAAGCGAACG TTGCCGATGC CAAGAGTCGT ATTGTAGATG TTGACTTTGC AAAGGAAACC
TCACAAATGA CGAAGAACCA AGTTTTACAA CAAACAGGTT CAGCCATGCT AGCTCAAGCT
AATCAGTTGC CACAAGTGGC ATTGTCATTG CTCTAA
 
Protein sequence
MAITVNTNVT SMKAQKNLNA SGNALATSME RLSSGLRINS AKDDAAGLAI SNRLNSQVRG 
LDVGMRNAND GISVAQIAEG AMQEQTNMLQ RMRDLSVQAV NGANSTSDKD AIQAEIDQLA
LEITAISNTT AFGDTKLLSG GFSAKSFQVG HQEGENISIS ISGTDAGTLS VDALLVSSDS
AASTSIGLID AAIKTIDTQR AKLGATQNRL AHNISNSANT QANVADAKSR IVDVDFAKET
SQMTKNQVLQ QTGSAMLAQA NQLPQVALSL L