Gene Shew185_2879 details

Gene Information

• Locus tag: Shew185_2879
• ID: 5369678
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 3455914
• End bp: 3456699
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640831123
• Product: hypothetical protein
• Protein accession: YP_001367076
• Protein GI: 153001395

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00000994717
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGATCTT ATTTTACACC TTTAACATTG CTATTCGGTT CTTTTCTGAC AACCATTGCC 
CAGGCTGATA CCCAGCTTTT AGTCACGACA TCCGCAAACC AGGGGGCACA GGTTCAACTC 
ACTTATCCAA CTGCTGTACG CCTCGAACAA GCCGTACAAG ACGGGTTAGT GCAACTGCCT 
AAATATAATA AAACCACTAG CAACGAAACT GTGCCGATTT ATTGGTTAGG CGCGGCACTA 
CTCGACATCC AAAATACTGC AGTTTTAGAA AATAAACGCA AAGAAGCCCT GTCCGAACTC 
GCTAAAGTGG GCGAAGCCTC AAATGACAGC ATCTACATAG CTAAGCTTGC AAAATTGGCG 
CAGTTTTTAC GGCAAATAAA ACTTGGCAAA CGCGTAATGC AGCCATTAGA CCTTGATCTC 
ATTCGAATAA CTGACTCATA CAACCCGCTC CTTGATGGTC GCTTTGAACT CGTTTTACCT 
CCTCGTCCTA CTACTATAGT TGTCGCGGGC GCCGTCGCTC GAACGGGCAG TTACGAATGG 
AAACTCAATA CCAGTAGTAA AGATTACCTA GCCAAAGCAC AACCACTGGA GAATTCAGAT 
GGTGACTTTG TATGGATAAT TCAACCCGAT GGCAACGCTA TAAAGCAGCC AATAGCCTAT 
TGGAATGCTC AAGCGCAAGA TATCGCGCCA GGTGCTGTGA TTTACCTTGA GTTTTCAGAC 
CTATTAGAAG ACTACAGCAC ATTAAATGCC AATATTATTG AATTACTAAG GAATCGGGCT 
CTGTAA 

 

Protein sequence

MRSYFTPLTL LFGSFLTTIA QADTQLLVTT SANQGAQVQL TYPTAVRLEQ AVQDGLVQLP 
KYNKTTSNET VPIYWLGAAL LDIQNTAVLE NKRKEALSEL AKVGEASNDS IYIAKLAKLA 
QFLRQIKLGK RVMQPLDLDL IRITDSYNPL LDGRFELVLP PRPTTIVVAG AVARTGSYEW 
KLNTSSKDYL AKAQPLENSD GDFVWIIQPD GNAIKQPIAY WNAQAQDIAP GAVIYLEFSD 
LLEDYSTLNA NIIELLRNRA L