Gene Shew185_2872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2872 
Symbol 
ID5369815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp3448730 
End bp3449374 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content50% 
IMG OID640831116 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001367069 
Protein GI153001388 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.61489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCGC CAACGCCTAG ATCAGAGCCG GCATCTTTGC CTGATTATCA AAGCCAGCAT 
AAAAAGCGTC TCTCTTGGAT GCCATGGCTG TATTTTTCTT TAAAAGAGAA ACATTTAGTC 
TGGGCAAAAC CTTGGCAGGA TGAGATCCAA GCAAAGCTTT GTGCCCTCGA AACAGTCAAC 
ATCGGCGAGC ATTGTTTTAT TGCACCCGAC GCGCAGTTAT TCGCCGAACC CAATCGTGAT 
ATCCGTATGG GTAATCGTTG CATGATCGCC GCCGACTGTT TTTTACACGG GCCCATCACG 
CTAGGGGATG AAGTGGCGAT TAATCATGGT TGCTCCTTCG ATGGTGGCAG AGTCGGTATT 
CAGATTGGCA GCCAGACTCG CATCGCCAAT AATGTAACCC TTTACGCCTT CAACCATGGC 
ATGGCGCCAG ATACGCCCAT CTATCAACAA GCTGCCAACT CCAAAGGCAT TGTTATAGGT 
AAAGATGTGT GGATTGGCGC TCAGGCCGGC ATAGTCGATG GTGTGACCAT TGGCGATCAC 
GCTGTGGTGG GTATGGGCAG CATAGTAACT AAAGATGTGC CCGACTGGGC GATAGTGGCA 
GGCAACCCCG CCAAAGTGAT TGGCGATAGA CGTGATAAAA GCTAA
 
Protein sequence
MSAPTPRSEP ASLPDYQSQH KKRLSWMPWL YFSLKEKHLV WAKPWQDEIQ AKLCALETVN 
IGEHCFIAPD AQLFAEPNRD IRMGNRCMIA ADCFLHGPIT LGDEVAINHG CSFDGGRVGI 
QIGSQTRIAN NVTLYAFNHG MAPDTPIYQQ AANSKGIVIG KDVWIGAQAG IVDGVTIGDH 
AVVGMGSIVT KDVPDWAIVA GNPAKVIGDR RDKS