| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2825 |
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| Symbol | |
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| ID | 5371299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3387097 |
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| End bp | 3387753 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640831069 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001367022 |
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| Protein GI | 153001341 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.192724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTGA TATCGCGAAT ATTTGGTTAT TTTGAAGAAG GTGTGCTCAA TTTATTGATC
ACTCTGATGA CGTTATTAGT GTTTTCAGAA GTCGTCGCAC GCTTCTTCTT CAATACGGGT
TTTCTGTGGA TCCAAGAACT CACACTGACC TTTTGCGGTT GGTTTGTGTT GTTTGGTATG
TCTTATGGGG TAAAAGTTGG CGCGCACATT GGTGTCGATG CCTTCGTTAA AAACTTAGCA
CCTCGGGCCA AAAAGATAAC GTCCCTCGTT ACCGCCTTTG TCTGTATCGT CTATTGCGGA
CTGTTTTTAA AGGGCAGTTG GGATTACTTA AGCCAGATGT ATCAAATTGG TGTGCCTATG
GAAGATATTA ATTTCCCCCA ATTTTTCTTA AAAAACCTCG ACCCAGACTT TGCTTGGAAC
ACCTTAAGGA TTGATGTTGA AGATGGCGCG GTACCGATTT GGTTATCCCA GAGCATCTTG
ATCATTGGTT TTTCGATGTT GACTTGGCGA TTCGCCGAAC TCTTTATTGC CATCCTACGT
GACCAAGTCA CTGGCTTCCA ATTTGCTGAT GAAGCGAAAG AAAGTATGCA TTTAATCGAT
GAAAGCGTTA AAAACGCCAA TGAAGAACCC GTCTCTGACG AAAAGGAGAC TAAATAA
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| Protein sequence | MAVISRIFGY FEEGVLNLLI TLMTLLVFSE VVARFFFNTG FLWIQELTLT FCGWFVLFGM
SYGVKVGAHI GVDAFVKNLA PRAKKITSLV TAFVCIVYCG LFLKGSWDYL SQMYQIGVPM
EDINFPQFFL KNLDPDFAWN TLRIDVEDGA VPIWLSQSIL IIGFSMLTWR FAELFIAILR
DQVTGFQFAD EAKESMHLID ESVKNANEEP VSDEKETK
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