Gene Shew185_2683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2683 
Symbol 
ID5372738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3210393 
End bp3211514 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content47% 
IMG OID640830912 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_001366881 
Protein GI153001200 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000153932 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGG TCGTGATTTC GGGGAGTGGC TTATTTACGC CGCCCCACAG TATTTCTAAT 
GAAGCCTTAG TTGAGAGCTT CAATGCCTAT GTGGATATTT ACAATCTTGA AAATGCAGGC
TTAATCGAGC AAGGCCATGT CGCGGCTTTG TCCTATTCCT CGAGCGAATT TATTGAAAAG
GCCTCGGGCA TCAAACACAG GTATGTGATG GTGAAAGAGG GCATTCTCGA TCCCGAAGTC
ATGATGCCGT TAATTCCAGA GCGCAGCAGC GACGAGTTAT CTATGCAGGC TGAAATTGGG
GTTGAAGCCG CATTGATGGC ACTTAACAAT GCCAATCTCA AAGCTGAGCA GATTGATTTA
GTCATTGTCG CCTGTGCTTA TACTCAGCGT GCCTATCCTG CGATGGCAAT TGAAATTCAA
CGTGCACTCG GTACGCGCGG TTATGGTTAC GACATGCAAG TGGCGTGTTC ATCGGCAACC
TTTGCAATTG TCGCCGCTGC TAATGCGATT GCTACGGGCT CAGCCTCAAG AGTGCTCGTC
ATTAACCCTG AGATTTGTTC GGCGCAGGTG AATTATCGCG ACCGTGACAG TCATTTTATC
TTTGGTGATG TCGCGACTGC TCTCGTACTG GAAGAGCAAA GCCTAGCTCA ATCTGACAAT
GTGTTTAAAA TTCTCTCAAG CCGCTGTTTT ACTGATTATT CGAATAATAT TCGCAGTAAT
TTTGGTTTCT TGAATCGCTG CGATCCGAGT GCTGCCCATC AGGCCGATAA ACTGTTCCAC
CAACAAGGGC GCAAAGTGTT TAAAGAGCTG CTACCGATGA TTTACCAACA TTTGGATGAA
CATCTGGCCG AACAAGCGTT AACGCCGCAG TCTTTTAAGC GTCTGTGGTT GCATCAAGCG
AACATCAACA TGAATCAGTT CGTGGTGAGA AAGCTGCTTG GGGATGATGT GTCAGCGGAA
CAAGCGCCTG TCGTATTAGA CGAGTACGCC AATACCGCAT CCGCGGGTTC TGTGATTGCA
TTTCACAAGT ATTCCAGCGA CTTTAAAGCG GGGGATTTAG GCTTGTTGAG TTCTTTTGGC
GCGGGATATT CCATCGGCAG TGTGATTTTG CAGAAGTGCT AA
 
Protein sequence
MKQVVISGSG LFTPPHSISN EALVESFNAY VDIYNLENAG LIEQGHVAAL SYSSSEFIEK 
ASGIKHRYVM VKEGILDPEV MMPLIPERSS DELSMQAEIG VEAALMALNN ANLKAEQIDL
VIVACAYTQR AYPAMAIEIQ RALGTRGYGY DMQVACSSAT FAIVAAANAI ATGSASRVLV
INPEICSAQV NYRDRDSHFI FGDVATALVL EEQSLAQSDN VFKILSSRCF TDYSNNIRSN
FGFLNRCDPS AAHQADKLFH QQGRKVFKEL LPMIYQHLDE HLAEQALTPQ SFKRLWLHQA
NINMNQFVVR KLLGDDVSAE QAPVVLDEYA NTASAGSVIA FHKYSSDFKA GDLGLLSSFG
AGYSIGSVIL QKC