| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2679 |
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| Symbol | |
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| ID | 5372645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3202547 |
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| End bp | 3204604 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640830908 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001366877 |
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| Protein GI | 153001196 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000018832 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACA TTCAACTCGA TACACTTCTG TCTGAAGACG TTACCCCAGA AAACGCATCG
CAGGTGATGC AGGCGCTCAG CCAATCACTG AACGAGCACA ACATTCGTTA CTATGTGGAT
GATGCGCCGA GCATTACCGA TTCTGAGTAC GACAGGTTGA TGCAGCGTTT ACTCAAGCTT
GAGGCGTTAT ACCCCCATTT GATTGTGGCT GATTCACCGA CTCAAAGGGT GGGCGGATTG
GCGCTCGCCA AGTTTGATCA GATCACTCAT CTTAAGCCTA TGTTAAGTCT GGATAACGCC
TTCGATGAGG CTGATTTCAG TGCTTTCCAC AAACGTGTCA CGGATAAAGT CGGTGAGGTG
AGTTTTTGCT GCGAGCCTAA ACTTGATGGC CTTGCCGTGA GTATCTTGTA TCGCCATGGC
GTGCTTGAGC GCGCTGCGAC CCGCGGCGAT GGTTCAGTGG GTGAAGACAT CACTGAAAAC
GTTAAAACCA TTAAATCGAT ACCGCTTAAA TTGCGCGGTA ATGATTTCCC TGAACTCGTT
GAAGTGCGCG GCGAAGCCTT TATGCCTAAA GCCGCCTTTG AAGCGCTGAA CGACAGGGCG
CGCGCCAAGG ATGAAAAGCT CTTTGTTAAT CCGCGTAACG CTGCTGCCGG CAGCTTGCGA
CAACTCGACA GTAAAATTAC CGCCGCCCGC TCATTGGCTT TTTATGCCTA TGCGCTAGGG
GTTGTTGAGC CGGATTCCCA TCCGTTAGCT AAAACCCATT TCGAGCAGTT ACAGCAGCTT
AAATCGTGGG GCTTACCCAT TAGTAGCGAA ATCAAAGTCT GCGCTGAATT AAGCCAAGTC
TATGACTACT ATAAGAACAT TCTTACTCGT CGCAGCGATT TAGCGTTTGA AATCGATGGC
GTAGTGATGA AAGTTAACGA TATTGCCCAG CAGCAACGTT TAGGTTTTGT GGCTAAATCT
CCCCGCTGGG CGATTGCCTA TAAATTCCCC GCACAGGAAG AAATGACTTT GCTCGAAGGG
GTTGATTTCC AAGTGGGCCG CACAGGTGCC GTGACGCCAG TCGCGCGCTT AAAGCCAGTA
TTTGTTGGTG GCGTGACGGT ATCGAATGCG ACGCTGCACA ATGCCGATGA AATTGCCCGC
TTAGGCATTA AAGTCGGTGA CACTGTGATC ATCCGCCGCG CTGGCGATGT GATCCCACAA
ATTGTTGCCA TAGTGCCAGA AAGACGTCCT GAAACGGCGA CTGACATTGT ATTTCCGCAT
AATTGCCCTG TGTGTGGCAG TTTAGTCGAG CGTCTCGAAG GTGAGGCAGT GGCGCGCTGT
AGCGGTGGTT TATTCTGCGA AGCGCAGCGT AAAGAAGCGA TTAAGCATTT CGCATCCCGC
AAGGCTTTGG ATATCGATGG CATGGGCGAC AAAGTCGTCG AGCAATTGAT TGATAAAGAA
CTCGTCCAAA GTCCTGCGGA TCTGTTTAAG CTCACCGCCT CTATGATGAC TATGCTCGAC
CGCATGGGGA TGAAGTCGGC AACCAATTTA GCAGCGGCGA TTGAAGCGGC CAAAACCACA
ACACTTGCGC GTTTCTTATA TGCCTTGGGC ATTCGCGAAG TGGGCGAGGC GACAGCGGCA
AACCTTGCGG CGCACTTTGC TAGTTTAGAT GCGCTGCGGG TGGCAACTGT GGAGCAGTTA
ACTGAAGTGG AAGATGTTGG CGCCGTGGTG GCCCAACATG TGGCCCACTT TTTTGCTCAG
CCGCATAACC TTGAGGTTAT CGATGCCTTA ATCGCCGCTG GTGTGCATTG GCCGGCCATT
GAAGCGCCAA GTGCTGATGC ACAGCCGCTT AAAGGCCAAA CCTGGGTATT GACCGGGACC
TTAAATCAAC TCAATCGTAA CGATGCTAAA GCGCAGCTGC AGGCGCTGGG GGCAAAAGTT
GCTGGCAGTG TGTCGAAAAA TACCGATTGC TTAGTGGCAG GTGAGGCGGC AGGTTCAAAA
CTCGCTAAAG CGCAGGAGCT TGGCGTTAAA GTGATGGATG AGGATGAGTT ATTGGCACTC
CTCGCCGCGA ACGCTTGA
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| Protein sequence | MQDIQLDTLL SEDVTPENAS QVMQALSQSL NEHNIRYYVD DAPSITDSEY DRLMQRLLKL
EALYPHLIVA DSPTQRVGGL ALAKFDQITH LKPMLSLDNA FDEADFSAFH KRVTDKVGEV
SFCCEPKLDG LAVSILYRHG VLERAATRGD GSVGEDITEN VKTIKSIPLK LRGNDFPELV
EVRGEAFMPK AAFEALNDRA RAKDEKLFVN PRNAAAGSLR QLDSKITAAR SLAFYAYALG
VVEPDSHPLA KTHFEQLQQL KSWGLPISSE IKVCAELSQV YDYYKNILTR RSDLAFEIDG
VVMKVNDIAQ QQRLGFVAKS PRWAIAYKFP AQEEMTLLEG VDFQVGRTGA VTPVARLKPV
FVGGVTVSNA TLHNADEIAR LGIKVGDTVI IRRAGDVIPQ IVAIVPERRP ETATDIVFPH
NCPVCGSLVE RLEGEAVARC SGGLFCEAQR KEAIKHFASR KALDIDGMGD KVVEQLIDKE
LVQSPADLFK LTASMMTMLD RMGMKSATNL AAAIEAAKTT TLARFLYALG IREVGEATAA
NLAAHFASLD ALRVATVEQL TEVEDVGAVV AQHVAHFFAQ PHNLEVIDAL IAAGVHWPAI
EAPSADAQPL KGQTWVLTGT LNQLNRNDAK AQLQALGAKV AGSVSKNTDC LVAGEAAGSK
LAKAQELGVK VMDEDELLAL LAANA
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