Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2676 |
Symbol | |
ID | 5369835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3199470 |
End bp | 3200333 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640830905 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001366874 |
Protein GI | 153001193 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.108906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAATG TAAAAGCAGA AAACGGCGCA GTAAAATCCA GTGTTGCCTT GGTCGGTTGT GGATGGTTTG GTTTTGCTTT AGCAAAGCAG CTTGTCCATG AGGGCTATAG AGTCACAGGC TGTAAGCGCA GCGCCGACGA ATTATCGGCA TTAACTGAGG TAGGGATTGA TGCCTATCCG CTGCAATTGG GCAGCGAAGC ACCCTTTGCC CCGGATGCTC AGGCATTAAG CGGTTTATTT CAAACCGATT ATCTAGTGGT CAATATTCCT CCCCGATTAA AGCGCGGTAA CGCCGCGTAT CTTGAAGAAC TGCAACAACT CATCGCATTA ACCCAAGGCT GGCAATATCA GCAGATTGTG TTTATCAGCA CTACGGGCGT GTATCCGGCC AAAGATAAAG TGATGACCGA AGCCGATGCC TTGGCAGAAT CTAGCGACAG CCAAGTGCTA TTAGATGCAG AAGCTTTATT CCAAGCCTTG CCCCATGCCT GTATTGTCCG CTTTGCTGGA CTCGTAGGCC CCAAACGTCA TCCTGGACGT TTTCTTGCCG GAAAAACCGA TGTCAGTGGC GCCAATGTGG CAGTGAATTT AGTCCACTTA AGTGATTGTG TCAGCGCGGT AAGTCAGATT CTCGCGGCAA CGGGTTCAGG TTTATCTGTG GCACCGATTT ATAATCTTTG CGCGCCGACA CACCCCACTA AAGCTGAGTT TTATCAAGCC GCCGCCGAGT CCCTTGGTTT AGTCGCGCCC GAATTTAATC AACAATCCAT GCCGAGTAAA GTCATCCAAG GTGACGCAAT TGTCACAGAT TTAGGCTTTC GATATCAGTA TGCTTCCCCG CTGGATATGC TAGCGGCATG TTGA
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Protein sequence | MANVKAENGA VKSSVALVGC GWFGFALAKQ LVHEGYRVTG CKRSADELSA LTEVGIDAYP LQLGSEAPFA PDAQALSGLF QTDYLVVNIP PRLKRGNAAY LEELQQLIAL TQGWQYQQIV FISTTGVYPA KDKVMTEADA LAESSDSQVL LDAEALFQAL PHACIVRFAG LVGPKRHPGR FLAGKTDVSG ANVAVNLVHL SDCVSAVSQI LAATGSGLSV APIYNLCAPT HPTKAEFYQA AAESLGLVAP EFNQQSMPSK VIQGDAIVTD LGFRYQYASP LDMLAAC
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