| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2660 |
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| Symbol | |
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| ID | 5369757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3170548 |
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| End bp | 3172191 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640830884 |
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| Product | hypothetical protein |
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| Protein accession | YP_001366858 |
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| Protein GI | 153001177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01887] dipeptidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00947468 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAAT CTGGTATTCA ACATGCTCGT GTACGTCGAG CGCTATCCTT GGCATTACTG
ACTGCGTCCA GCTGGGTTAT GCCGCAGTGT ATTGCAGCGC CAGCAACAAC AGCGGCTCAC
ACAAACGTTC CTCAGTTAAG CCCAAATGCG CTAAAGGCCG CCGATTATGC GGTCGCAAAA
TACGATGCGG CTATGGTGCA GAGTTTGACT CAGTTGGTGA GTTTTAATAC CCAAGCGGTT
GAAGGGCAAA CGCCAGATAC CAATCCCGCC TTTGTGGGCT TCAAGTCGAG TTTAAAGCAA
CTCAGTCAGG ATCTCGGGTT AGATTATGCC GATCATGGCT ATGTGGTGTT GATTGGCCTA
GATGCCAATT CGGCTGTTAA CAATGAATCT AAAAAGTTAG GCATAGTCAC CCACGGCGAT
GTGCAACCAG CTAATCCTGC ATTGTGGGCG CAGAGCCCTT ATCTGCTTGA TACTCAATCG
GAACCAGGCA AACTGATTGG CCGCGGCACA GAGGACGACA AGGGCGCCAT TGTCACTGCC
ATGTATGCGA TGAAGGCGAT TAAAGATAAA CACATTAAGC GAGATAGACG CATTGAACTC
TTGGTTTATC TTGCAGAAGA GTCCGACTGG GAACCACTGA AAACCTTTTT AGCCAGCTAC
ACGCCAGCGG ACATGAACAT TACTATCGAT GCCGAATATC CAGTAGTTAC TGCCGAAAAA
GGCTGGAGCA AGATTACCTT TACAGTGCCC AATATTACGA TCTCCAATAT AGAAGCTAAA
GCAGAGGCTT CAAACCAAAC TCCCACGTTA ACCGCTTTCT CTGGCGGCTA TTTTGCCAGC
CAAGTACCGC AGCAGGCCGA GGCGGAAATT GAGGCGGTTT CACCCGCATT ACTGACAAAG
TTACAGACCA GAGCCGCCGC GCAGCAGGGG ATGAAATATC GTTTTGAAAA CCATTGCGTC
GATAAACAGT GCAACTTGCA TATCTTTGCC GACGGTAAAG CCGCCCATTC ATCCACTCCT
GAAGATGGAG TGAATGCCGT GACGCATTTA GCGGCATTAT TAAGTCCCGA GTTGAATGAT
AAACCTTGGC CGCAAACCAG CGCCTCCTTA ACCGTTGCCG CCATGGACGA GCTGGTGGGG
TTAGGCATTT ATGCCGAGCA GTTTGGTGAC TTAGCCTATA AAGATGATTT TATGGGACCG
CTGACCTTAG CTCCGACTGT GGTGGTGCAA ACGCAGAAGG GCACTGAGGT GACCATTAAC
TTGCGCCGTC CTGTCGGCAA AACACCAGAG TTACTCGCTA AACAAGCCCG TGAAGCCCTA
GCACTGTGGC AGGAGAAACA TCAAGTGCAA CTTGCTGATA TCGAAAGTTA TTGGGGCGAG
CCTATGGTGA TGAAGGACGC GCCGCAGCAA CAAACCCTGC TCGACGTGTT TGCCCACTTC
ACTGGCATAG TCAACCCTAA ACCCGTTGCA ATTGGCGGCT CAACCAACAG TAAATTATTC
CCCAATGCCT TAAGTTTTGG CCCAGCCATG CCGGGCGTGG AATACACTGG CCATACCGAA
AAAGAGTTCA TCACCCATAA GCAATTTATG CTGAATCTAA AAATGTACAC CGCAGCGTTT
ATCGAGCTAT CGGCGGTGAA ATAA
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| Protein sequence | MSQSGIQHAR VRRALSLALL TASSWVMPQC IAAPATTAAH TNVPQLSPNA LKAADYAVAK
YDAAMVQSLT QLVSFNTQAV EGQTPDTNPA FVGFKSSLKQ LSQDLGLDYA DHGYVVLIGL
DANSAVNNES KKLGIVTHGD VQPANPALWA QSPYLLDTQS EPGKLIGRGT EDDKGAIVTA
MYAMKAIKDK HIKRDRRIEL LVYLAEESDW EPLKTFLASY TPADMNITID AEYPVVTAEK
GWSKITFTVP NITISNIEAK AEASNQTPTL TAFSGGYFAS QVPQQAEAEI EAVSPALLTK
LQTRAAAQQG MKYRFENHCV DKQCNLHIFA DGKAAHSSTP EDGVNAVTHL AALLSPELND
KPWPQTSASL TVAAMDELVG LGIYAEQFGD LAYKDDFMGP LTLAPTVVVQ TQKGTEVTIN
LRRPVGKTPE LLAKQAREAL ALWQEKHQVQ LADIESYWGE PMVMKDAPQQ QTLLDVFAHF
TGIVNPKPVA IGGSTNSKLF PNALSFGPAM PGVEYTGHTE KEFITHKQFM LNLKMYTAAF
IELSAVK
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