| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2519 |
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| Symbol | |
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| ID | 5372141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3010995 |
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| End bp | 3012542 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640830732 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001366719 |
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| Protein GI | 153001038 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAAG CCAAGTTTGT TGAAGGCCCC ATATTACGCC ACATCTTAGT GATGAGTTCG
ACCGCCGCTG TGGGGATTTC TGCCTTATTT GTGGTGGATT TACTGGATAT CTTTTTCCTG
AGCTTATTGG GGGAGCATGA GCTTGCTGCG GCTGTGGGTT ATGCGGGCAG TATCTCCTTT
TTCACTACGT CCATTGGGAT AGGGTTATCA ATTGCATTAG GCGCCTTAGT GTCTCGCTCA
ATTGGTGCAA AAGATGTGGT GCTGGCAAAG CGGCTATTGC TCAATAGCGC AGTGGTGACA
ACGCTGATTA GCGTGCTGGT GGCCGCAGTG GTCACTACCT TCATCCCTGA GCTGGTTGCC
TTAGTAGGCG CGAGTGGTCA TACGGCTGAG CTTGCTGCCA GTTATTTGTA TATCTTAGTG
CCTTCCTTGC CCTTTATTTG TCTTGCGATG GCGCTCGGCG GGGCTTTGCG CGCCGTGGGT
GATGCAAAGT TATCCATGAT GTCGACCTTA GCGGGCGGCG GAGTCAATGC GGTGCTCGAC
CCGATTTTTA TCTTCATGTT CGCAATGGGG ATAGAAGGCG CAGCATTGGC ATCCGTCTTA
GCGCGGGTGG CGGTATTTGT GATTGCCGGT CGCGGCGTTG TGGTTAAGCA TAAGTTGTTA
GGTCATTTCG ATAAGGCGCA CTTTATCGCC GATCTAAAAC CCATCTTTGC CATTGCGGGA
CCTGCGATGT TAACTAATGT GGCAACGCCT ATCGGTAATG CCTTTGTGAC CCGAGCCATT
GCCGATTTCG GTGACGCTTA TGTGGCGGGC TGGGCGGTAT TAGGGCGTTT GATCCCAGTG
ACCTTTGGGA TGATCTTTGC GCTCTCGGGC GCGATTGGCC CTATTGTTGG GCAAAACTTT
GGTGCGGGGC AGTTTGACCG AGTGCGCGAG AGTTTAACCC GCGCCATCCA GTTTTGTACT
GTGTATGTGT TGGTGATGTC TCTGTTGCTG TTTGCGCTTA AGTCGCATTT GGTCAATGTG
TTTGATATGA AGGGCGACAG CGCCGACCTT ATCCACTTCT TCTGCAGTTA TATCGCGGTA
TTCTTTATCT TTTCGGGGAT TTTATTTGTG GCAAATGCGT CCTTTAATAA CCTCGGCAAG
GCTAAATACT CCACCCTGTT CAATGTCGGT AAAGCCACCT TAGGCACAGT GCCTTTTGTG
TATTTTGGTG CACTCTGGGG CGGAGTTTAC GGCGTATTGA TTGGGCAAAT ATTAGGGTCT
ATTTTGTTTG GCACCTTAGG TGTGTGGGTT GCTTATCGTT TAGTGGATAA AGTGGCGGCG
CAGGCACAGT TCTCCGCGAT GGTGAATGTC GGTGGCGTCA ATGCTGTTCC CCGCAATGTT
GCGCTGACTG AGGAAGAAGA AATCGCTAAC TGTGTGGCGG AGAACTTGCC GAGCGCGACC
AATCCGCTTT CATCCTCCTG CGTGCAGATG GCGCAATTAA CCGAGGAGCA AGAGAGTGAG
TCGGTATTGC CGATAACGTA TTTGGAAGAA GGTAAAAAGC CGAACTGA
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| Protein sequence | MTQAKFVEGP ILRHILVMSS TAAVGISALF VVDLLDIFFL SLLGEHELAA AVGYAGSISF
FTTSIGIGLS IALGALVSRS IGAKDVVLAK RLLLNSAVVT TLISVLVAAV VTTFIPELVA
LVGASGHTAE LAASYLYILV PSLPFICLAM ALGGALRAVG DAKLSMMSTL AGGGVNAVLD
PIFIFMFAMG IEGAALASVL ARVAVFVIAG RGVVVKHKLL GHFDKAHFIA DLKPIFAIAG
PAMLTNVATP IGNAFVTRAI ADFGDAYVAG WAVLGRLIPV TFGMIFALSG AIGPIVGQNF
GAGQFDRVRE SLTRAIQFCT VYVLVMSLLL FALKSHLVNV FDMKGDSADL IHFFCSYIAV
FFIFSGILFV ANASFNNLGK AKYSTLFNVG KATLGTVPFV YFGALWGGVY GVLIGQILGS
ILFGTLGVWV AYRLVDKVAA QAQFSAMVNV GGVNAVPRNV ALTEEEEIAN CVAENLPSAT
NPLSSSCVQM AQLTEEQESE SVLPITYLEE GKKPN
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